Lineage for d3dvgx_ (3dvg X:)

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1637451Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1637452Superfamily d.15.1: Ubiquitin-like [54236] (9 families) (S)
  5. 1637453Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 1637639Protein Ubiquitin [54238] (7 species)
  7. 1637706Species Human (Homo sapiens) [TaxId:9606] [54239] (126 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 1637863Domain d3dvgx_: 3dvg X: [157892]
    Other proteins in same PDB: d3dvga1, d3dvga2, d3dvgb1, d3dvgb2
    automated match to d1aara_

Details for d3dvgx_

PDB Entry: 3dvg (more details), 2.6 Å

PDB Description: Crystal structure of K63-specific fab Apu.3A8 bound to K63-linked di-ubiquitin
PDB Compounds: (X:) Ubiquitin D77

SCOPe Domain Sequences for d3dvgx_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3dvgx_ d.15.1.1 (X:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
shmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsd
yniqkestlhlvlrl

SCOPe Domain Coordinates for d3dvgx_:

Click to download the PDB-style file with coordinates for d3dvgx_.
(The format of our PDB-style files is described here.)

Timeline for d3dvgx_: