SCOP 1.75: Domain d3dstb1: 3dst B:7-331

Lineage for d3dstb1 (3dst B:7-331)

1. Root: SCOP 1.75

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
   multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies

4. Superfamily a.102.4: Terpenoid cyclases/Protein prenyltransferases [48239] (4 families)

5. Family a.102.4.3: Protein prenyltransferases [48246] (2 proteins)

6. Protein Rab geranylgeranyltransferase, beta subunit [48249] (1 species)

7. Species Rat (Rattus norvegicus) [TaxId:10116] [48250] (9 PDB entries)

8. Domain d3dstb1: 3dst B:7-331 [157842]
   automatically matched to d1dceb_
   complexed with ca, grg, zn

Details for d3dstb1

PDB Entry: 3dst, 1.9 Å

PDB Description: crystal structure of rabggtase(delta lrr; delta ig)in complex with geranylgeranyl pyrophosphate

PDB Compounds: (B:) Geranylgeranyl transferase type-2 subunit beta

SCOP Domain Sequences for d3dstb1:

Sequence, based on SEQRES records:

>d3dstb1 a.102.4.3 (B:7-331) Rab geranylgeranyltransferase, beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
dvtiksdapdtlllekhadyiasygskkddyeycmseylrmsgvywgltvmdlmgqlhrm
nkeeilvfikscqhecggvsasighdphllytlsavqiltlydsihvinvdkvvayvqsl
qkedgsfagdiwgeidtrfsfcavatlallgkldainvekaiefvlscmnfdggfgcrpg
seshagqiycctgflaitsqlhqvnsdllgwwlcerqlpsgglngrpeklpdvcyswwvl
aslkiigrlhwidreklrsfilacqdeetggfadrpgdmvdpfhtlfgiaglsllgeeqi
kpvspvfcmpeevlqrvnvqpelvs

Sequence, based on observed residues (ATOM records):

>d3dstb1 a.102.4.3 (B:7-331) Rab geranylgeranyltransferase, beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
dvtiksdapdtlllekhadyiasygskdyeycmseylrmsgvywgltvmdlmgqlhrmnk
eeilvfikscqhecggvsasighdphllytlsavqiltlydsihvinvdkvvayvqslqk
edgsfagdiwgeidtrfsfcavatlallgkldainvekaiefvlscmnfdggfgcrpgse
shagqiycctgflaitsqlhqvnsdllgwwlcerqlpsgglngrpeklpdvcyswwvlas
lkiigrlhwidreklrsfilacqdeetggfadrpgdmvdpfhtlfgiaglsllgeeqikp
vspvfcmpeevlqrvnvqpelvs

Timeline for d3dstb1:

• d3dstb1 is new in SCOP 1.75
  
• d3dstb1 is called d3dstb_ in SCOPe 2.01
  
• d3dstb1 appears in the current release, SCOPe 2.08, called d3dstb_