SCOPe 2.04: Domain d3dssb_: 3dss B:

Lineage for d3dssb_ (3dss B:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
   multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies

4. Superfamily a.102.4: Terpenoid cyclases/Protein prenyltransferases [48239] (5 families)

5. Family a.102.4.3: Protein prenyltransferases [48246] (3 proteins)

6. Protein Rab geranylgeranyltransferase, beta subunit [48249] (1 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [48250] (21 PDB entries)

8. Domain d3dssb_: 3dss B: [157841]
   automated match to d1dceb_
   complexed with ca, zn

Details for d3dssb_

PDB Entry: 3dss, 1.8 Å

PDB Description: crystal structure of rabggtase(delta lrr; delta ig)

PDB Compounds: (B:) Geranylgeranyl transferase type-2 subunit beta

SCOPe Domain Sequences for d3dssb_:

Sequence; same for both SEQRES and ATOM records:

>d3dssb_ a.102.4.3 (B:) Rab geranylgeranyltransferase, beta subunit {Norway rat (Rattus norvegicus) [TaxId: 10116]}
qkdvtiksdapdtlllekhadyiasygskkddyeycmseylrmsgvywgltvmdlmgqlh
rmnkeeilvfikscqhecggvsasighdphllytlsavqiltlydsihvinvdkvvayvq
slqkedgsfagdiwgeidtrfsfcavatlallgkldainvekaiefvlscmnfdggfgcr
pgseshagqiycctgflaitsqlhqvnsdllgwwlcerqlpsgglngrpeklpdvcysww
vlaslkiigrlhwidreklrsfilacqdeetggfadrpgdmvdpfhtlfgiaglsllgee
qikpvspvfcmpeevlqrvnvqpelvs

Timeline for d3dssb_:

• d3dssb_ first appeared in SCOP 1.75, called d3dssb1
  
• d3dssb_ appears in SCOPe 2.03
  
• d3dssb_ appears in SCOPe 2.05
  
• d3dssb_ appears in the current release, SCOPe 2.08