SCOPe 2.03: Domain d3dpyb1: 3dpy B:22-423

Lineage for d3dpyb1 (3dpy B:22-423)

1. Root: SCOPe 2.03

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
   multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies

4. Superfamily a.102.4: Terpenoid cyclases/Protein prenyltransferases [48239] (5 families)

5. Family a.102.4.3: Protein prenyltransferases [48246] (3 proteins)

6. Protein Protein farnesyltransferase, beta-subunit [48247] (3 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [48248] (49 PDB entries)
   Uniprot Q02293 22-418 P53610

8. Domain d3dpyb1: 3dpy B:22-423 [157826]
   Other proteins in same PDB: d3dpya1
   automatically matched to d1ft1b_
   complexed with acy, fpp, zn

Details for d3dpyb1

PDB Entry: 3dpy, 2.7 Å

PDB Description: Protein farnesyltransferase complexed with FPP and caged TKCVIM substrate

PDB Compounds: (B:) Protein farnesyltransferase subunit beta

SCOPe Domain Sequences for d3dpyb1:

Sequence; same for both SEQRES and ATOM records:

>d3dpyb1 a.102.4.3 (B:22-423) Protein farnesyltransferase, beta-subunit {Norway rat (Rattus norvegicus) [TaxId: 10116]}
plyslrpeharerlqddsvetvtsieqakveekiqevfssykfnhlvprlvlqrekhfhy
lkrglrqltdayecldasrpwlcywilhslelldepipqivatdvcqflelcqspdggfg
ggpgqyphlaptyaavnalciigteeaynvinrekllqylyslkqpdgsflmhvggevdv
rsaycaasvasltniitpdlfegtaewiarcqnweggiggvpgmeahggytfcglaalvi
lkkerslnlksllqwvtsrqmrfeggfqgrcnklvdgcysfwqagllpllhralhaqgdp
alsmshwmfhqqalqeyilmccqcpagglldkpgksrdfyhtcyclsglsiaqhfgsgam
lhdvvmgvpenvlqpthpvynigpdkviqatthflqkpvpgf

Timeline for d3dpyb1:

• d3dpyb1 first appeared in SCOP 1.75
  
• d3dpyb1 appears in SCOPe 2.02
  
• d3dpyb1 appears in SCOPe 2.04
  
• d3dpyb1 appears in the current release, SCOPe 2.08