SCOPe 2.06: Domain d3df4t1: 3df4 T:1-93

Lineage for d3df4t1 (3df4 T:1-93)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.12: Ribosomal proteins S24e, L23 and L15e [54188] (1 superfamily)
   beta-(alpha)-beta-alpha-beta(2); 3 layers: alpha/beta/alpha; antiparallel beta-sheet: order 1243

4. Superfamily d.12.1: Ribosomal proteins S24e, L23 and L15e [54189] (3 families)

5. Family d.12.1.1: L23p [54190] (1 protein)
   automatically mapped to Pfam PF00276

6. Protein Ribosomal protein L23 [54191] (4 species)

7. Species Escherichia coli [TaxId:562] [159878] (28 PDB entries)
   Uniprot P02424 1-99

8. Domain d3df4t1: 3df4 T:1-93 [157703]
   Other proteins in same PDB: d3df401, d3df411, d3df431, d3df441, d3df4c1, d3df4c2, d3df4d1, d3df4e1, d3df4f1, d3df4g1, d3df4g2, d3df4h1, d3df4h2, d3df4i1, d3df4i2, d3df4j1, d3df4k1, d3df4l1, d3df4m1, d3df4n1, d3df4o1, d3df4p1, d3df4q1, d3df4r1, d3df4s1, d3df4u1, d3df4v1, d3df4w1, d3df4x1, d3df4y1, d3df4z1
   protein/RNA complex; complexed with mg, zn
   protein/RNA complex; complexed with mg, zn

Details for d3df4t1

PDB Entry: 3df4, 3.5 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 50S subunit of the second 70S ribosome. The entire crystal structure contains two 70S ribosomes.

PDB Compounds: (T:) 50S ribosomal protein L23

SCOPe Domain Sequences for d3df4t1:

Sequence; same for both SEQRES and ATOM records:

>d3df4t1 d.12.1.1 (T:1-93) Ribosomal protein L23 {Escherichia coli [TaxId: 562]}
mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevvnt
lvvkgkvkrhgqrigrrsdwkkayvtlkegqnl

Timeline for d3df4t1:

• d3df4t1 first appeared in SCOP 1.75
  
• d3df4t1 appears in SCOPe 2.05
  
• d3df4t1 appears in SCOPe 2.07
  
• d3df4t1 appears in the current release, SCOPe 2.08