SCOPe 2.04: Domain d3df4s1: 3df4 S:1-110

Lineage for d3df4s1 (3df4 S:1-110)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.55: Ribosomal protein L22 [54842] (1 superfamily)
   beta-alpha(3)-beta(2); 2 layers: alpha/beta; related to the enolase/MLE N-domain fold by a circular permutation

4. Superfamily d.55.1: Ribosomal protein L22 [54843] (1 family)
   some topological similarity to prokaryotic ribosomal protein L17

5. Family d.55.1.1: Ribosomal protein L22 [54844] (1 protein)

6. Protein Ribosomal protein L22 [54845] (5 species)

7. Species Escherichia coli [TaxId:562] [160266] (29 PDB entries)
   Uniprot P61175 1-110

8. Domain d3df4s1: 3df4 S:1-110 [157702]
   Other proteins in same PDB: d3df401, d3df411, d3df431, d3df441, d3df4c1, d3df4c2, d3df4d1, d3df4e1, d3df4f1, d3df4g1, d3df4g2, d3df4h1, d3df4h2, d3df4i1, d3df4i2, d3df4j1, d3df4k1, d3df4l1, d3df4m1, d3df4n1, d3df4o1, d3df4p1, d3df4q1, d3df4r1, d3df4t1, d3df4u1, d3df4v1, d3df4w1, d3df4x1, d3df4y1, d3df4z1
   automatically matched to 2AW4 S:1-110
   protein/RNA complex; complexed with mg, zn

Details for d3df4s1

PDB Entry: 3df4, 3.5 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 50S subunit of the second 70S ribosome. The entire crystal structure contains two 70S ribosomes.

PDB Compounds: (S:) 50S ribosomal protein L22

SCOPe Domain Sequences for d3df4s1:

Sequence; same for both SEQRES and ATOM records:

>d3df4s1 d.55.1.1 (S:1-110) Ribosomal protein L22 {Escherichia coli [TaxId: 562]}
metiakhrharssaqkvrlvadlirgkkvsqaldiltytnkkaavlvkkvlesaianaeh
ndgadiddlkvtkifvdegpsmkrimprakgradrilkrtshitvvvsdr

Timeline for d3df4s1:

• d3df4s1 first appeared in SCOP 1.75
  
• d3df4s1 appears in SCOPe 2.03
  
• d3df4s1 appears in SCOPe 2.05
  
• d3df4s1 appears in the current release, SCOPe 2.08