SCOP 1.75: Domain d3df2j1: 3df2 J:1-140

Lineage for d3df2j1 (3df2 J:1-140)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.21: Ribosomal protein L13 [52160] (1 superfamily)
   3 layers, a/b/a; core: parallel beta-sheet of 4 strands, order 3214

4. Superfamily c.21.1: Ribosomal protein L13 [52161] (1 family)

5. Family c.21.1.1: Ribosomal protein L13 [52162] (1 protein)

6. Protein Ribosomal protein L13 [52163] (5 species)
   synonym: 50S ribosomal protein L13p, HMAL13

7. Species Escherichia coli [TaxId:562] [159474] (29 PDB entries)
   Uniprot P02410 1-140

8. Domain d3df2j1: 3df2 J:1-140 [157639]
   Other proteins in same PDB: d3df201, d3df211, d3df231, d3df241, d3df2c1, d3df2c2, d3df2d1, d3df2e1, d3df2f1, d3df2g1, d3df2g2, d3df2h1, d3df2h2, d3df2i1, d3df2i2, d3df2k1, d3df2l1, d3df2m1, d3df2n1, d3df2o1, d3df2p1, d3df2q1, d3df2r1, d3df2s1, d3df2t1, d3df2u1, d3df2v1, d3df2w1, d3df2x1, d3df2y1, d3df2z1
   automatically matched to 2AW4 J:1-140
   complexed with mg, zn

Details for d3df2j1

PDB Entry: 3df2, 3.5 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 50S subunit of the first 70S ribosome. The entire crystal structure contains two 70S ribosomes.

PDB Compounds: (J:) 50S ribosomal protein L13

SCOP Domain Sequences for d3df2j1:

Sequence; same for both SEQRES and ATOM records:

>d3df2j1 c.21.1.1 (J:1-140) Ribosomal protein L13 {Escherichia coli [TaxId: 562]}
mktftakpetvkrdwyvvdatgktlgrlatelarrlrgkhkaeytphvdtgdyiivlnad
kvavtgnkrtdkvyyhhtghiggikqatfeemiarrpervieiavkgmlpkgplgramfr
klkvyagnehnhaaqqpqvl

Timeline for d3df2j1:

• d3df2j1 is new in SCOP 1.75
  
• d3df2j1 appears in SCOPe 2.01
  
• d3df2j1 appears in the current release, SCOPe 2.08