SCOPe 2.05: Domain d3dcga_: 3dcg A:

Lineage for d3dcga_ (3dcg A:)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (9 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Elongin B [54246] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54247] (27 PDB entries)

8. Domain d3dcga_: 3dcg A: [157535]
   Other proteins in same PDB: d3dcgb_, d3dcgd_
   automated match to d1lm8b_
   protein/RNA complex

Details for d3dcga_

PDB Entry: 3dcg, 2.4 Å

PDB Description: Crystal Structure of the HIV Vif BC-box in Complex with Human ElonginB and ElonginC

PDB Compounds: (A:) Transcription elongation factor B polypeptide 2

SCOPe Domain Sequences for d3dcga_:

Sequence, based on SEQRES records:

>d3dcga_ d.15.1.1 (A:) Elongin B {Human (Homo sapiens) [TaxId: 9606]}
mdvflmirrhkttiftdakesstvfelkrivegilkrppdeqrlykddqllddgktlgec
gftsqtarpqapatvglafraddtfealciepfssppelp

Sequence, based on observed residues (ATOM records):

>d3dcga_ d.15.1.1 (A:) Elongin B {Human (Homo sapiens) [TaxId: 9606]}
mdvflmirrhkttiftdakesstvfelkrivegilkrppdeqrlykddqllddgktlgec
gftsqtarpqapatvglafradtfealciepfssppelp

Timeline for d3dcga_:

• d3dcga_ first appeared in SCOP 1.75, called d3dcga1
  
• d3dcga_ appears in SCOPe 2.04
  
• d3dcga_ appears in SCOPe 2.06
  
• d3dcga_ appears in the current release, SCOPe 2.08