SCOPe 2.08: Domain d3d5fb_: 3d5f B:

Lineage for d3d5fb_ (3d5f B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein automated matches [190059] (14 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187214] (171 PDB entries)

8. Domain d3d5fb_: 3d5f B: [157398]
   automated match to d1gwxa_
   protein/DNA complex; complexed with l41

Details for d3d5fb_

PDB Entry: 3d5f, 2.2 Å

PDB Description: crystal structure of ppar-delta complex

PDB Compounds: (B:) Peroxisome proliferator-activated receptor delta

SCOPe Domain Sequences for d3d5fb_:

Sequence, based on SEQRES records:

>d3d5fb_ a.123.1.1 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwkqlvng
lppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifaml
asivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfiaa
iilcgdrpglmnvprveaiqdtilralefhlqanhpdaqqlfpkllqkmadlrqlvteha
qmmqrikktetetslhpllqeiykdmy

Sequence, based on observed residues (ATOM records):

>d3d5fb_ a.123.1.1 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lkafskhiynaylknfnmtkkkarsiltpfvihdietlwqaekglvwlppykeisvhvfy
rcqcttvetvreltefaksipsfsslflndqvtllkygvheaifamlasivnkdgllvan
gsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfiaaiilcgdrpglmnv
prveaiqdtilralefhlqanhpdaqqlfpkllqkmadlrqlvtehaqmmqrikktetet
slhpllqeiykdmy

Timeline for d3d5fb_:

• d3d5fb_ first appeared in SCOP 1.75, called d3d5fb1
  
• d3d5fb_ appears in SCOPe 2.07