Lineage for d3d4vd1 (3d4v D:100-281)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2329190Fold a.96: DNA-glycosylase [48149] (1 superfamily)
    multihelical; consists of two all-alpha domains
  4. 2329191Superfamily a.96.1: DNA-glycosylase [48150] (7 families) (S)
  5. 2329232Family a.96.1.3: DNA repair glycosylase, 2 C-terminal domains [48157] (3 proteins)
  6. 2329233Protein 3-Methyladenine DNA glycosylase II (gene alkA or aidA) [48158] (1 species)
  7. 2329234Species Escherichia coli [TaxId:562] [48159] (11 PDB entries)
    Uniprot P04395
  8. 2329272Domain d3d4vd1: 3d4v D:100-281 [157308]
    Other proteins in same PDB: d3d4va2, d3d4vb2, d3d4vc2, d3d4vd2
    automated match to d1mpga1
    protein/DNA complex

Details for d3d4vd1

PDB Entry: 3d4v (more details), 2.9 Å

PDB Description: crystal structure of an alka host/guest complex n7methylguanine:cytosine base pair
PDB Compounds: (D:) DNA-3-methyladenine glycosylase 2

SCOPe Domain Sequences for d3d4vd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3d4vd1 a.96.1.3 (D:100-281) 3-Methyladenine DNA glycosylase II (gene alkA or aidA) {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d3d4vd1:

Click to download the PDB-style file with coordinates for d3d4vd1.
(The format of our PDB-style files is described here.)

Timeline for d3d4vd1: