Lineage for d3d2uh2 (3d2u H:98-198)

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 781542Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 781543Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 787055Family b.1.1.4: I set domains [49159] (38 proteins)
  6. 787303Protein Ligand binding domain of lir-1 (ilt2) [49206] (1 species)
    possibly an intermediate structure between the I set and FnIII domains
  7. 787304Species Human (Homo sapiens) [TaxId:9606] [49207] (5 PDB entries)
    Uniprot Q8NHL6 25-218
  8. 787312Domain d3d2uh2: 3d2u H:98-198 [157260]
    Other proteins in same PDB: d3d2ub1, d3d2uf1
    automatically matched to d1g0xa2
    complexed with bma, fuc, man, nag; mutant

Details for d3d2uh2

PDB Entry: 3d2u (more details), 2.21 Å

PDB Description: structure of ul18, a peptide-binding viral mhc mimic, bound to a host inhibitory receptor
PDB Compounds: (H:) Leukocyte immunoglobulin-like receptor subfamily B member 1

SCOP Domain Sequences for d3d2uh2:

Sequence, based on SEQRES records: (download)

>d3d2uh2 b.1.1.4 (H:98-198) Ligand binding domain of lir-1 (ilt2) {Human (Homo sapiens) [TaxId: 9606]}
ayikptlsaqpspvvnsggnvtlqcdsqvafdgfilckegedehpqclnsqphargssra
ifsvgpvspsrrwwyrcyaydsnspyewslpsdllellvlg

Sequence, based on observed residues (ATOM records): (download)

>d3d2uh2 b.1.1.4 (H:98-198) Ligand binding domain of lir-1 (ilt2) {Human (Homo sapiens) [TaxId: 9606]}
ayikptlsaqpspvvnsggnvtlqcdsqvafdgfilckegeqclnsraifsvgpvspsrr
wwyrcyaydsnspyewslpsdllellvlg

SCOP Domain Coordinates for d3d2uh2:

Click to download the PDB-style file with coordinates for d3d2uh2.
(The format of our PDB-style files is described here.)

Timeline for d3d2uh2: