Lineage for d3d0pa1 (3d0p A:62-193)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2122050Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2123751Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 2123752Family c.55.3.1: Ribonuclease H [53099] (5 protein domains)
  6. 2123753Protein BH0863-like Ribonuclease H [142490] (3 species)
    new class of RNase H
  7. 2123754Species Bacillus halodurans [TaxId:86665] [142491] (21 PDB entries)
    Uniprot Q9KEI9 61-193! Uniprot Q9KEI9 62-193
  8. 2123775Domain d3d0pa1: 3d0p A:62-193 [157172]
    automatically matched to d1zbfa1
    protein/DNA complex; protein/RNA complex; complexed with na

Details for d3d0pa1

PDB Entry: 3d0p (more details), 1.8 Å

PDB Description: Insights into RNA/DNA hybrid recognition and processing by RNase H from the crystal structure of a non-specific enzyme-dsDNA complex
PDB Compounds: (A:) Ribonuclease H

SCOPe Domain Sequences for d3d0pa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3d0pa1 c.55.3.1 (A:62-193) BH0863-like Ribonuclease H {Bacillus halodurans [TaxId: 86665]}

SCOPe Domain Coordinates for d3d0pa1:

Click to download the PDB-style file with coordinates for d3d0pa1.
(The format of our PDB-style files is described here.)

Timeline for d3d0pa1: