SCOPe 2.08: Domain d3ctdb_: 3ctd B:

Lineage for d3ctdb_ (3ctd B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.80: post-AAA+ oligomerization domain-like [48018] (1 superfamily)
   core: 5 helices: bundle

4. Superfamily a.80.1: post-AAA+ oligomerization domain-like [48019] (2 families)
   associated with N-terminal domain from the AAA+ family of P-loop hydrolases

5. Family a.80.1.2: MgsA/YrvN C-terminal domain-like [158600] (3 proteins)
   automatically mapped to Pfam PF12002

6. Protein Uncharacterized protein YrvN [158605] (1 species)

7. Species Prochlorococcus marinus [TaxId:1219] [158606] (1 PDB entry)
   Uniprot Q7V3J8 258-420
   PMM0077

8. Domain d3ctdb_: 3ctd B: [156982]
   automated match to d3ctda1

Details for d3ctdb_

PDB Entry: 3ctd, 2.5 Å

PDB Description: crystal structure of a putative aaa family atpase from prochlorococcus marinus subsp. pastoris

PDB Compounds: (B:) Putative ATPase, AAA family

SCOPe Domain Sequences for d3ctdb_:

Sequence, based on SEQRES records:

>d3ctdb_ a.80.1.2 (B:) Uncharacterized protein YrvN {Prochlorococcus marinus [TaxId: 1219]}
hfdvisafiksirgsdpdatlywlanmveagedpnfifrrllisacedigladpnaivvv
qsccdafdrvgfpeglfflsqaslylaispksnstksifkameaikatnvslvpnhlknn
asnylnphnyqgkwlqqeylptdlqgikfwkpkdsgweknkyed

Sequence, based on observed residues (ATOM records):

>d3ctdb_ a.80.1.2 (B:) Uncharacterized protein YrvN {Prochlorococcus marinus [TaxId: 1219]}
hfdvisafiksirgsdpdatlywlanmveagedpnfifrrllisacedigladpnaivvv
qsccdafdrvgfpeglfflsqaslylaispksnstksifkameaikslvpnhlknnasny
lnphnyqgkwlqqeylptdlqgikfwkpkgweknkyed

Timeline for d3ctdb_:

• d3ctdb_ first appeared in SCOP 1.75, called d3ctdb1
  
• d3ctdb_ appears in SCOPe 2.07