SCOPe 2.07: Domain d3cqzb_: 3cqz B:

Lineage for d3cqzb_ (3cqz B:)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.29: beta and beta-prime subunits of DNA dependent RNA-polymerase [64483] (1 superfamily)
   Multidomain subunits of complex domain organization

4. Superfamily e.29.1: beta and beta-prime subunits of DNA dependent RNA-polymerase [64484] (3 families)
   The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit

5. Family e.29.1.1: RNA-polymerase beta [64485] (4 proteins)

6. Protein automated matches [190192] (4 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187158] (5 PDB entries)

8. Domain d3cqzb_: 3cqz B: [156930]
   Other proteins in same PDB: d3cqza1, d3cqzf1, d3cqzh_, d3cqzj_, d3cqzk_, d3cqzl1
   automated match to d1i50b_
   protein/DNA complex; protein/RNA complex; complexed with zn

Details for d3cqzb_

PDB Entry: 3cqz, 2.8 Å

PDB Description: Crystal structure of 10 subunit RNA polymerase II in complex with the inhibitor alpha-amanitin

PDB Compounds: (B:) DNA-directed RNA polymerase II subunit RPB2

SCOPe Domain Sequences for d3cqzb_:

Sequence, based on SEQRES records:

>d3cqzb_ e.29.1.1 (B:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhtt
esdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyea
idvpgrelkyeliaeeseddsesgkvfigrlpimlrskncylseatesdlyklkecpfdm
ggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvkly
gregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcve
dgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflg
yminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveea
hdfnmklainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtn
tpigrdgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitfls
ewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdi
rekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdieggfedveey
twssllneglveyidaeeeesiliamqpedlepaeaneendldvdpakrirvshhattft
hceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyyp
qkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsy
mdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpis
pdeeelgqrtayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdk
fasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsg
negdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmv
ddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafr
vhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytd
rs

Sequence, based on observed residues (ATOM records):

>d3cqzb_ e.29.1.1 (B:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstleisfgkiyvt
kpmvnesdgvthalypqearlrnltyssglfvdvkkesgkvfigrlpimlrskncylsea
tesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsal
ekgistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvnd
wqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitql
egfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkd
ifrlainaktitsglkyalatgnwagvsqvlnrytysstlshlrrtntpigrdgklakpr
qlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvph
qspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagr
vyrplfiveddeslghkelkvrkghiaklmateyqdveeytwssllneglveyidaeeee
siliamqpedlepdvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprnt
yqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaia
cysgynqedsmimnqssidrglfrslffrsymdqekkitetfekpqrtrmkhgtydkldd
dgliapgvrvsgedviigkttpskrdastplrstengivdqvlvttnqdglkfvkvrvrt
tkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecl
lskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgpt
yyqrlrhmvglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviahnqf
eckgcdnkidiyqihipyaakllfqelmamnitprlytdrs

Timeline for d3cqzb_:

• d3cqzb_ first appeared in SCOP 1.75, called d3cqzb1
  
• d3cqzb_ appears in SCOPe 2.06
  
• d3cqzb_ appears in the current release, SCOPe 2.08