SCOP 1.75: Domain d3cq8a2: 3cq8 A:376-902

Lineage for d3cq8a2 (3cq8 A:376-902)

1. Root: SCOP 1.75

2. Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (6 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.1: DNA polymerase I [56673] (4 proteins)

6. Protein Family B DNA polymerase [56680] (7 species)

7. Species Bacteriophage RB69 [TaxId:12353] [56681] (15 PDB entries)

8. Domain d3cq8a2: 3cq8 A:376-902 [156928]
   Other proteins in same PDB: d3cq8a1
   automatically matched to d1clqa2
   complexed with ca, gol, na, ttp; mutant

Details for d3cq8a2

PDB Entry: 3cq8, 2.5 Å

PDB Description: ternary complex of the l415f mutant rb69 exo(-)polymerase

PDB Compounds: (A:) DNA polymerase

SCOP Domain Sequences for d3cq8a2:

Sequence; same for both SEQRES and ATOM records:

>d3cq8a2 e.8.1.1 (A:376-902) Family B DNA polymerase {Bacteriophage RB69 [TaxId: 12353]}
qnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsfypsiirqvnispetiagtfk
vaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrn
geiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmta
qinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegea
fvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymn
nkqhlmfmdreaiagpplgskgiggfwtgkkryalnvwdmegtryaepklkimgletqks
stpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvgg
fpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteit
dlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfd

Timeline for d3cq8a2:

• d3cq8a2 is new in SCOP 1.75
  
• d3cq8a2 appears in SCOPe 2.01
  
• d3cq8a2 appears in the current release, SCOPe 2.08