SCOPe 2.08: Domain d3ckcb_: 3ckc B:

Lineage for d3ckcb_ (3ckc B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.8: TPR-like [48452] (11 families)

5. Family a.118.8.6: SusD-like [158775] (4 proteins)
   TPR-like structure resides in the N-terminal part; the C-terminal part is structurally unique and is covered by Pfam PF07980

6. Protein Starch utilization system protein SusD [158780] (1 species)

7. Species Bacteroides thetaiotaomicron [TaxId:818] [158781] (5 PDB entries)
   Uniprot Q8A1G2 42-551

8. Domain d3ckcb_: 3ckc B: [156737]
   automated match to d3ck7a1
   complexed with ca, edo, mes, peg

Details for d3ckcb_

PDB Entry: 3ckc, 1.5 Å

PDB Description: b. thetaiotaomicron susd

PDB Compounds: (B:) SusD

SCOPe Domain Sequences for d3ckcb_:

Sequence, based on SEQRES records:

>d3ckcb_ a.118.8.6 (B:) Starch utilization system protein SusD {Bacteroides thetaiotaomicron [TaxId: 818]}
fdqqgvfvkgyamlgvtgqkgidgspdldgqdegesgfyrttfncnelptdeclwawqkn
qdipqltsiswspssqrtewvyvrlgyditqynffldqtegmtdaetlrqraeirflral
hywyfldlfgkapfkehfsndlpvekkgtelytyiqnelneieadmyeprqapfgradka
anwllrarlylnagvytgqtdyakaeeyaskvigsayklctnyselfmadndenenamqe
iilpirqdgvktrnyggstylvcgtrvagmprmgttngwscifaraamvqkffsnledvp
mlpadveiptkgldtdeqidafdaehgirtedmikaagddrallysgvgggrrkiqtdai
sgftdglsivkwqnyrsdgkpvshatypdtdiplfrlaeayltraeaifrqggdatgdin
elrkranctrkvqtvteqelidewarefylegrrrsdlvrfgmfttnkylwdwkggamng
tsvasyynkypipvsdinnnrnmsqnegyk

Sequence, based on observed residues (ATOM records):

>d3ckcb_ a.118.8.6 (B:) Starch utilization system protein SusD {Bacteroides thetaiotaomicron [TaxId: 818]}
fdqqgvfvkgyamlgvtgdgqdegesgfyrttfncnelptdeclwawqknqdipqltsis
wspssqrtewvyvrlgyditqynffldqtegmtdaetlrqraeirflralhywyfldlfg
kapfkehfsndlpvekkgtelytyiqnelneieadmyeprqapfgradkaanwllrarly
lnagvytgqtdyakaeeyaskvigsayklctnyselfmadndenenamqeiilpirqdgv
ktrnyggstylvcgtrvagmprmgttngwscifaraamvqkffsnledvpmlpadveipt
kgldtdeqidafdaehgirtedmikaagddrallysgvgggrrkiqtdaisgftdglsiv
kwqnyrsdgkpvshatypdtdiplfrlaeayltraeaifrqggdatgdinelrkranctr
kvqtvteqelidewarefylegrrrsdlvrfgmfttnkylwdwkggamngtsvasyynky
pipvsdinnnrnmsqnegyk

Timeline for d3ckcb_:

• d3ckcb_ first appeared in SCOP 1.75, called d3ckcb1
  
• d3ckcb_ appears in SCOPe 2.07