Lineage for d3ckbb_ (3ckb B:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2332674Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2333768Superfamily a.118.8: TPR-like [48452] (10 families) (S)
  5. 2333995Family a.118.8.6: SusD-like [158775] (4 protein domains)
    TPR-like structure resides in the N-terminal part; the C-terminal part is structurally unique and is covered by Pfam PF07980
  6. 2333996Protein Starch utilization system protein SusD [158780] (1 species)
  7. 2333997Species Bacteroides thetaiotaomicron [TaxId:818] [158781] (5 PDB entries)
    Uniprot Q8A1G2 42-551
  8. 2334009Domain d3ckbb_: 3ckb B: [156735]
    automated match to d3ck7a1
    complexed with ca, mlr

Details for d3ckbb_

PDB Entry: 3ckb (more details), 2.3 Å

PDB Description: B. thetaiotaomicron SusD with maltotriose
PDB Compounds: (B:) SusD

SCOPe Domain Sequences for d3ckbb_:

Sequence, based on SEQRES records: (download)

>d3ckbb_ a.118.8.6 (B:) Starch utilization system protein SusD {Bacteroides thetaiotaomicron [TaxId: 818]}
sfdqqgvfvkgyamlgvtgqkgidgspdldgqdegesgfyrttfncnelptdeclwawqk
nqdipqltsiswspssqrtewvyvrlgyditqynffldqtegmtdaetlrqraeirflra
lhywyfldlfgkapfkehfsndlpvekkgtelytyiqnelneieadmyeprqapfgradk
aanwllrarlylnagvytgqtdyakaeeyaskvigsayklctnyselfmadndenenamq
eiilpirqdgvktrnyggstylvcgtrvagmprmgttngwscifaraamvqkffsnledv
pmlpadveiptkgldtdeqidafdaehgirtedmikaagddrallysgvgggrrkiqtda
isgftdglsivkwqnyrsdgkpvshatypdtdiplfrlaeayltraeaifrqggdatgdi
nelrkranctrkvqtvteqelidewarefylegrrrsdlvrfgmfttnkylwdwkggamn
gtsvasyynkypipvsdinnnrnmsqnegyk

Sequence, based on observed residues (ATOM records): (download)

>d3ckbb_ a.118.8.6 (B:) Starch utilization system protein SusD {Bacteroides thetaiotaomicron [TaxId: 818]}
sfdqqgvfvkgyamlgvtgdgqdegesgfyrttfncnelptdeclwawqknqdipqltsi
swspssqrtewvyvrlgyditqynffldqtegmtdaetlrqraeirflralhywyfldlf
gkapfkehfsndlpvekkgtelytyiqnelneieadmyeprqapfgradkaanwllrarl
ylnagvytgqtdyakaeeyaskvigsayklctnyselfmadndenenamqeiilpirqdg
vktrnyggstylvcgtrvagmprmgttngwscifaraamvqkffsnledvpmlpadveip
tkgldtdeqidafdaehgirtedmikaagddrallysgvgggrrkiqtdaisgftdglsi
vkwqnyrsdgkpvshatypdtdiplfrlaeayltraeaifrqggdatgdinelrkranct
rkvqtvteqelidewarefylegrrrsdlvrfgmfttnkylwdwkggamngtsvasyynk
ypipvsdinnnrnmsqnegyk

SCOPe Domain Coordinates for d3ckbb_:

Click to download the PDB-style file with coordinates for d3ckbb_.
(The format of our PDB-style files is described here.)

Timeline for d3ckbb_: