Lineage for d3ck7d_ (3ck7 D:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2006336Fold a.118: alpha-alpha superhelix [48370] (25 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2007336Superfamily a.118.8: TPR-like [48452] (9 families) (S)
  5. 2007546Family a.118.8.6: SusD-like [158775] (4 protein domains)
    TPR-like structure resides in the N-terminal part; the C-terminal part is structurally unique and is covered by Pfam PF07980
  6. 2007547Protein Starch utilization system protein SusD [158780] (1 species)
  7. 2007548Species Bacteroides thetaiotaomicron [TaxId:818] [158781] (5 PDB entries)
    Uniprot Q8A1G2 42-551
  8. 2007556Domain d3ck7d_: 3ck7 D: [156729]
    automated match to d3ck7a1
    complexed with acx, ca

Details for d3ck7d_

PDB Entry: 3ck7 (more details), 2.1 Å

PDB Description: B. thetaiotaomicron SusD with alpha-cyclodextrin
PDB Compounds: (D:) SusD

SCOPe Domain Sequences for d3ck7d_:

Sequence, based on SEQRES records: (download)

>d3ck7d_ a.118.8.6 (D:) Starch utilization system protein SusD {Bacteroides thetaiotaomicron [TaxId: 818]}
gsfdqqgvfvkgyamlgvtgqkgidgspdldgqdegesgfyrttfncnelptdeclwawq
knqdipqltsiswspssqrtewvyvrlgyditqynffldqtegmtdaetlrqraeirflr
alhywyfldlfgkapfkehfsndlpvekkgtelytyiqnelneieadmyeprqapfgrad
kaanwllrarlylnagvytgqtdyakaeeyaskvigsayklctnyselfmadndenenam
qeiilpirqdgvktrnyggstylvcgtrvagmprmgttngwscifaraamvqkffsnled
vpmlpadveiptkgldtdeqidafdaehgirtedmikaagddrallysgvgggrrkiqtd
aisgftdglsivkwqnyrsdgkpvshatypdtdiplfrlaeayltraeaifrqggdatgd
inelrkranctrkvqtvteqelidewarefylegrrrsdlvrfgmfttnkylwdwkggam
ngtsvasyynkypipvsdinnnrnmsqnegyk

Sequence, based on observed residues (ATOM records): (download)

>d3ck7d_ a.118.8.6 (D:) Starch utilization system protein SusD {Bacteroides thetaiotaomicron [TaxId: 818]}
gsfdqqgvfvkgyamlgvtdegesgfyrttfncnelptdeclwawqknqdipqltsisws
pssqrtewvyvrlgyditqynffldqtegmtdaetlrqraeirflralhywyfldlfgka
pfkehfsndlpvekkgtelytyiqnelneieadmyeprqapfgradkaanwllrarlyln
agvytgqtdyakaeeyaskvigsayklctnyselfmadndenenamqeiilpirqdgvkt
rnyggstylvcgtrvagmprmgttngwscifaraamvqkffsnledvpmlpadveiptkg
ldtdeqidafdaehgirtedmikaagddrallysgvgggrrkiqtdaisgftdglsivkw
qnyrsdgkpvshatypdtdiplfrlaeayltraeaifrqggdatgdinelrkranctrkv
qtvteqelidewarefylegrrrsdlvrfgmfttnkylwdwkggamngtsvasyynkypi
pvsdinnnrnmsqnegyk

SCOPe Domain Coordinates for d3ck7d_:

Click to download the PDB-style file with coordinates for d3ck7d_.
(The format of our PDB-style files is described here.)

Timeline for d3ck7d_: