SCOP 1.75: Domain d3cema1: 3cem A:23-830

Lineage for d3cema1 (3cem A:23-830)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
   consists of two non-similar domains with 3 layers (a/b/a) each
   domain 1: parallel beta-sheet of 7 strands, order 3214567
   domain 2: parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (11 families)

5. Family c.87.1.4: Oligosaccharide phosphorylase [53766] (2 proteins)

6. Protein Glycogen phosphorylase [53767] (3 species)
   both domains are elaborated with many insertions

7. Species Human (Homo sapiens) [TaxId:9606] [53768] (13 PDB entries)

8. Domain d3cema1: 3cem A:23-830 [156528]
   automatically matched to d1noja_
   complexed with avd, nbg, plp

Details for d3cema1

PDB Entry: 3cem, 2.47 Å

PDB Description: human glycogen phosphorylase (tense state) in complex with the allosteric inhibitor ave9423

PDB Compounds: (A:) Glycogen phosphorylase, liver form

SCOP Domain Sequences for d3cema1:

Sequence, based on SEQRES records:

>d3cema1 c.87.1.4 (A:23-830) Glycogen phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
nvaelkksfnrhlhftlvkdrnvattrdyyfalahtvrdhlvgrwirtqqhyydkcpkrv
yylslefymgrtlqntminlglqnacdeaiyqlgldieeleeieedaglgngglgrlaac
fldsmatlglaaygygiryeygifnqkirdgwqveeaddwlrygnpweksrpefmlpvhf
ygkvehtntgtkwidtqvvlalpydtpvpgymnntvntmrlwsarapndfnlrdfnvgdy
iqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrfkaskfgstrga
gtvfdafpdqvaiqlndthpalaipelmrifvdieklpwskaweltqktfaytnhtvlpe
alerwpvdlvekllprhleiiyeinqkhldrivalfpkdvdrlrrmslieeegskrinma
hlcivgshavngvakihsdivktkvfkdfselepdkfqnktngitprrwlllcnpglael
iaekigedyvkdlsqltklhsflgddvflrelakvkqenklkfsqfleteykvkinpssm
fdvqvkriheykrqllnclhvitmynrikkdpkklfvprtviiggkaapgyhmakmiikl
itsvadvvnndpmvgsklkviflenyrvslaekvipatdlseqistagteasgtgnmkfm
lngaltigtmdganvemaeeageenlfifgmriddvaaldkkgyeakeyyealpelklvi
dqidngffspkqpdlfkdiinmlfyhdrfkvfadyeayvkcqdkvsqlymnpkawntmvl
kniaasgkfssdrtikeyaqniwnveps

Sequence, based on observed residues (ATOM records):

>d3cema1 c.87.1.4 (A:23-830) Glycogen phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
nvaelkksfnrhlhftlvkdrnvattrdyyfalahtvrdhlvgrwirtqqhyydkcpkrv
yylslefymgrtlqntminlglqnacdeaiyqlgldieeleeieedaglgngglgrlaac
fldsmatlglaaygygiryeygifnqkirdgwqveeaddwlrygnpweksrpefmlpvhf
ygkvehtntgtkwidtqvvlalpydtpvpgymnntvntmrlwsarapndfdyiqavldrn
laenisrvlypndnffegkelrlkqeyfvvaatlqdiirrfkaskftvfdafpdqvaiql
ndthpalaipelmrifvdieklpwskaweltqktfaytnhtvlpealerwpvdlvekllp
rhleiiyeinqkhldrivalfpkdvdrlrrmslieeegskrinmahlcivgshavngvak
ihsdivktkvfkdfselepdkfqnktngitprrwlllcnpglaeliaekigedyvkdlsq
ltklhsflgddvflrelakvkqenklkfsqfleteykvkinpssmfdvqvkriheykrql
lnclhvitmynrikkdpkklfvprtviiggkaapgyhmakmiiklitsvadvvnndpmvg
sklkviflenyrvslaekvipatdlseqistagteasgtgnmkfmlngaltigtmdganv
emaeeageenlfifgmriddvaaldkkgyeakeyyealpelklvidqidngffspkqpdl
fkdiinmlfyhdrfkvfadyeayvkcqdkvsqlymnpkawntmvlkniaasgkfssdrti
keyaqniwnveps

Timeline for d3cema1:

• d3cema1 is new in SCOP 1.75
  
• d3cema1 appears in SCOPe 2.01
  
• d3cema1 appears in the current release, SCOPe 2.08, called d3cema_