Class b: All beta proteins [48724] (180 folds) |
Fold b.106: Phage tail proteins [69278] (1 superfamily) core: barrel; n=6, S=10; greek-key; topologically similar to the FMN-binding split barrel |
Superfamily b.106.1: Phage tail proteins [69279] (4 families) |
Family b.106.1.1: Baseplate protein-like [69280] (4 proteins) duplication: consists of two similar barrel domains that differ by the first strand directions; the barrels are differently decorated by alpha+beta insertions |
Protein Baseplate protein gpP, N-terminal domain [418926] (3 species) 43 kda tail protein; Pfam PF06893 |
Species Shewanella oneidensis [TaxId:70863] [419358] (1 PDB entry) Uniprot Q8EDP4 Prophage MuSo2 |
Domain d3cddd2: 3cdd D:2-180 [156507] Other proteins in same PDB: d3cdda1, d3cddb1, d3cddc1, d3cddd1, d3cdde1, d3cdde3, d3cddf1 automated match to d3cdda2 has additional insertions and/or extensions that are not grouped together |
PDB Entry: 3cdd (more details), 2.1 Å
SCOPe Domain Sequences for d3cddd2:
Sequence, based on SEQRES records: (download)
>d3cddd2 b.106.1.1 (D:2-180) Baseplate protein gpP, N-terminal domain {Shewanella oneidensis [TaxId: 70863]} seeivlkaggkiyqgwtkigitrsleamsgafdlemtykflgndaqykafiepikqgqac tvdiggervitgyvddwvpsydestitisvsgrdktadlvdcsidypsgqfnnqtltqia divckpfgikvivntdvgepfqriqieqgetphellarlakqrgvlltsdtfgnlvitr
>d3cddd2 b.106.1.1 (D:2-180) Baseplate protein gpP, N-terminal domain {Shewanella oneidensis [TaxId: 70863]} seeivlkaggkiyqgwtkigitrsleamsgafdlemtykfndaqykafiepikqgqactv diggervitgyvddwvpsydestitisvsgrdktadlvdcsidypsgqfnnqtltqiadi vckpfgikvivntdvgepfqriqieqgetphellarlakqrgvlltsdtfgnlvitr
Timeline for d3cddd2: