Lineage for d3by5a1 (3by5 A:8-130)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2494568Fold c.151: CobE/GbiG C-terminal domain-like [159663] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32154; strand 5 is antiparallel to the rest
  4. 2494569Superfamily c.151.1: CobE/GbiG C-terminal domain-like [159664] (1 family) (S)
    probably involved in deacylation steps in both anaerobic and aerobic pathways of cobalamin biosynthesis
    automatically mapped to Pfam PF01890
  5. 2494570Family c.151.1.1: CobE/GbiG C-terminal domain-like [159665] (3 proteins)
    C-terminal part of Pfam PF01890 (CbiG); corresponds to standalone protein CobE in the aerobic pathway; also includes resent structure 3BY5
  6. 2494571Protein Cobalamin biosynthesis protein CobE [159666] (2 species)
    predicted to facilitate the deacylation of precorrin-5 intermediate; this step can proceed non-enzymatically in vitro
  7. 2494572Species Agrobacterium tumefaciens [TaxId:358] [159667] (1 PDB entry)
    Uniprot A9CHC6 8-130
    CobE orthologue Atu2797/ChiG; typo in the (mis)annotation
  8. 2494573Domain d3by5a1: 3by5 A:8-130 [155721]
    complexed with so4

Details for d3by5a1

PDB Entry: 3by5 (more details), 2.52 Å

PDB Description: crystal structure of cobalamin biosynthesis protein chig from agrobacterium tumefaciens str. c58
PDB Compounds: (A:) Cobalamin biosynthesis protein

SCOPe Domain Sequences for d3by5a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3by5a1 c.151.1.1 (A:8-130) Cobalamin biosynthesis protein CobE {Agrobacterium tumefaciens [TaxId: 358]}

SCOPe Domain Coordinates for d3by5a1:

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Timeline for d3by5a1: