Lineage for d3brfa2 (3brf A:197-380)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2033752Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 2034243Superfamily b.2.5: p53-like transcription factors [49417] (8 families) (S)
  5. 2034659Family b.2.5.8: DNA-binding protein LAG-1 (CSL) [110080] (1 protein)
  6. 2034660Protein DNA-binding protein LAG-1 (CSL) [110081] (1 species)
  7. 2034661Species Nematode (Caenorhabditis elegans) [TaxId:6239] [110082] (4 PDB entries)
    Uniprot Q9TYY1 195-660
  8. 2034663Domain d3brfa2: 3brf A:197-380 [155509]
    Other proteins in same PDB: d3brfa1, d3brfa3
    protein/DNA complex; complexed with sor

Details for d3brfa2

PDB Entry: 3brf (more details), 2.47 Å

PDB Description: csl (lag-1) bound to dna with lin-12 ram peptide, c2221
PDB Compounds: (A:) Lin-12 and glp-1 phenotype protein 1, isoform a

SCOPe Domain Sequences for d3brfa2:

Sequence, based on SEQRES records: (download)

>d3brfa2 b.2.5.8 (A:197-380) DNA-binding protein LAG-1 (CSL) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
sltsdrmidflsnkekyecvisifhakvaqksygnekrffcpppciyligqgwklkkdrv
aqlyktlkasaqkdaaiendpiheqqatelvayigigsdtserqqldfstgkvrhpgdqr
qdpniydycaaktlyisdsdkrkyfdlnaqffygcgmeiggfvsqrikviskpskkkqsm
kntd

Sequence, based on observed residues (ATOM records): (download)

>d3brfa2 b.2.5.8 (A:197-380) DNA-binding protein LAG-1 (CSL) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
sltsdrmidflsnkekyecvisifhakvaqksygnekrffcpppciyligqgwklkkdrv
aqlyktltelvayigigsdtserqqldfpniydycaaktlyisdsdkrkyfdlnaqffyg
cgmeiggfvsqrikviskpskkkqsd

SCOPe Domain Coordinates for d3brfa2:

Click to download the PDB-style file with coordinates for d3brfa2.
(The format of our PDB-style files is described here.)

Timeline for d3brfa2: