SCOPe 2.08: Domain d3brda2: 3brd A:195-380

Lineage for d3brda2 (3brd A:195-380)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
   sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold

4. Superfamily b.2.5: p53-like transcription factors [49417] (8 families)

5. Family b.2.5.8: DNA-binding protein LAG-1 (CSL) [110080] (1 protein)

6. Protein DNA-binding protein LAG-1 (CSL) [110081] (1 species)

7. Species Nematode (Caenorhabditis elegans) [TaxId:6239] [110082] (4 PDB entries)
   Uniprot Q9TYY1 195-660

8. Domain d3brda2: 3brd A:195-380 [155506]
   Other proteins in same PDB: d3brda1, d3brda3
   automated match to d1ttua2
   protein/DNA complex; complexed with edo

Details for d3brda2

PDB Entry: 3brd, 2.21 Å

PDB Description: csl (lag-1) bound to dna with lin-12 ram peptide, p212121

PDB Compounds: (A:) Lin-12 and glp-1 phenotype protein 1, isoform a

SCOPe Domain Sequences for d3brda2:

Sequence, based on SEQRES records:

>d3brda2 b.2.5.8 (A:195-380) DNA-binding protein LAG-1 (CSL) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
vqsltsdrmidflsnkekyecvisifhakvaqksygnekrffcpppciyligqgwklkkd
rvaqlyktlkasaqkdaaiendpiheqqatelvayigigsdtserqqldfstgkvrhpgd
qrqdpniydycaaktlyisdsdkrkyfdlnaqffygcgmeiggfvsqrikviskpskkkq
smkntd

Sequence, based on observed residues (ATOM records):

>d3brda2 b.2.5.8 (A:195-380) DNA-binding protein LAG-1 (CSL) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
vqsltsdrmidflsnkekyecvisifhakvaqksygnekrffcpppciyligqgwklkkd
rvaqlyktlqqatelvayigigsdtserqqldfpniydycaaktlyisdsdkrkyfdlna
qffygcgmeiggfvsqrikviskpskkktd

Timeline for d3brda2:

• d3brda2 first appeared in SCOP 1.75
  
• d3brda2 appears in SCOPe 2.07