SCOPe 2.06: Domain d3bola1: 3bol A:301-558

Lineage for d3bola1 (3bol A:301-558)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.21: Dihydropteroate synthetase-like [51717] (3 families)

5. Family c.1.21.2: Methyltetrahydrofolate-utiluzing methyltransferases [51723] (3 proteins)

6. Protein Cobalamin-dependent methionine synthase MetH, C-terminal domain [102104] (1 species)
   5-methyltetrahydrofolate homocysteine S-methyltransferase

7. Species Thermotoga maritima [TaxId:2336] [102105] (8 PDB entries)

8. Domain d3bola1: 3bol A:301-558 [155453]
   Other proteins in same PDB: d3bola2, d3bolb2
   automated match to d1q7za1
   complexed with hcs, k, yt3, zn

Details for d3bola1

PDB Entry: 3bol, 1.85 Å

PDB Description: Cobalamin-dependent methionine synthase (1-566) from Thermotoga maritima complexed with Zn2+

PDB Compounds: (A:) 5-methyltetrahydrofolate S-homocysteine methyltransferase

SCOPe Domain Sequences for d3bola1:

Sequence, based on SEQRES records:

>d3bola1 c.1.21.2 (A:301-558) Cobalamin-dependent methionine synthase MetH, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
favsspsklvtfdhfvvigerinpagrkklwaemqkgneeivikeaktqvekgaevldvn
fgiesqidvryvekivqtlpyvsnvplsldiqnvdlteralraypgrslfnsakvdeeel
emkinllkkyggtlivllmgkdvpksfeerkeyfekalkilerhdfsdrvifdpgvlplg
aegkpvevlktiefisskgfnttvglsnlsfglpdrsyyntaflvlgiskglssaimnpl
detlmktlnatlvilekk

Sequence, based on observed residues (ATOM records):

>d3bola1 c.1.21.2 (A:301-558) Cobalamin-dependent methionine synthase MetH, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
favsspsklvtfdhfvvigerinpagrkklwaemqkgneeivikeaktqvekgaevldvn
fgiesqidvryvekivqtlpyvsnvplsldiqnvdlteralraypgrslfnsakvdeeel
emkinllkkyggtlivllmgkdvpksfeerkeyfekalkilerhdfsdrvifdpgvlplg
aegkpvevlktiefisskgfnttvglsnlsflpdrsyyntaflvlgiskglssaimnpld
etlmktlnatlvilekk

Timeline for d3bola1:

• d3bola1 first appeared in SCOP 1.75
  
• d3bola1 appears in SCOPe 2.05
  
• d3bola1 appears in SCOPe 2.07
  
• d3bola1 appears in the current release, SCOPe 2.08