SCOPe 2.08: Domain d3bofa2: 3bof A:1-300

Lineage for d3bofa2 (3bof A:1-300)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.26: Homocysteine S-methyltransferase [82282] (1 family)

5. Family c.1.26.1: Homocysteine S-methyltransferase [82283] (2 proteins)
   Pfam PF02574

6. Protein Cobalamin-dependent methionine synthase MetH, N-terminal domain [102108] (1 species)
   5-methyltetrahydrofolate homocysteine S-methyltransferase

7. Species Thermotoga maritima [TaxId:2336] [102109] (8 PDB entries)

8. Domain d3bofa2: 3bof A:1-300 [155446]
   Other proteins in same PDB: d3bofa1, d3bofb1
   automated match to d1q7qa2
   complexed with hcs, k, yt3, zn

Details for d3bofa2

PDB Entry: 3bof, 1.7 Å

PDB Description: Cobalamin-dependent methionine synthase (1-566) from Thermotoga maritima complexed with Zn2+ and Homocysteine

PDB Compounds: (A:) 5-methyltetrahydrofolate S-homocysteine methyltransferase

SCOPe Domain Sequences for d3bofa2:

Sequence; same for both SEQRES and ATOM records:

>d3bofa2 c.1.26.1 (A:1-300) Cobalamin-dependent methionine synthase MetH, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
mrnrrevskllservllldgaygtefmkygyddlpeelnikapdvvlkvhrsyiesgsdv
iltntfgatrmklrkhgledkldpivrnavriarraageklvfgdigptgelpyplgstl
feefyenfretveimveegvdgiifetfsdilelkaavlaarevsrdvfliahmtfdekg
rsltgtdpanfaitfdeldidalgincslgpeeilpifqelsqytdkflvvepnagkpiv
engktvyplkphdfavhidsyyelgvnifggccgttpehvklfrkvlgnrkplqrkkkri

Timeline for d3bofa2:

• d3bofa2 first appeared in SCOP 1.75
  
• d3bofa2 appears in SCOPe 2.07