Lineage for d3bdmc_ (3bdm C:)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2594580Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2594581Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2594772Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 2599521Protein automated matches [190144] (14 species)
    not a true protein
  7. 2599542Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187078] (41 PDB entries)
  8. 2599652Domain d3bdmc_: 3bdm C: [155132]
    Other proteins in same PDB: d3bdm0_, d3bdm1_, d3bdma_, d3bdme_, d3bdmf_, d3bdmi_, d3bdmj_, d3bdmk_, d3bdmm_, d3bdmn_, d3bdmo_, d3bdms_, d3bdmt_, d3bdmw_, d3bdmx_, d3bdmy_
    automated match to d1g65c_
    complexed with gdt

Details for d3bdmc_

PDB Entry: 3bdm (more details), 2.7 Å

PDB Description: yeast 20S proteasome:glidobactin A-complex
PDB Compounds: (C:) Proteasome component PRE6

SCOPe Domain Sequences for d3bdmc_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3bdmc_ d.153.1.4 (C:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
gydralsifspdghifqveyaleavkrgtcavgvkgkncvvlgcerrstlklqdtritps
kvskidshvvlsfsglnadsriliekarveaqshrltledpvtveyltryvagvqqrytq
sggvrpfgvstliagfdprddepklyqtepsgiysswsaqtigrnsktvrefleknydrk
eppatveecvkltvrsllevvqtgaknieitvvkpdsdivalsseeinqyvtqieqekqe
q

SCOPe Domain Coordinates for d3bdmc_:

Click to download the PDB-style file with coordinates for d3bdmc_.
(The format of our PDB-style files is described here.)

Timeline for d3bdmc_: