SCOPe 2.08: Domain d3bc8a1: 3bc8 A:23-467

Lineage for d3bc8a1 (3bc8 A:23-467)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.9: SepSecS-like [159704] (2 proteins)
   Pfam PF05889

6. Protein Selenocysteinyl-tRNA synthase (SepSecS) [159705] (3 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [159706] (3 PDB entries)
   Uniprot Q6P6M7 23-467

8. Domain d3bc8a1: 3bc8 A:23-467 [155124]
   complexed with cl, edo

Details for d3bc8a1

PDB Entry: 3bc8, 1.65 Å

PDB Description: crystal structure of mouse selenocysteine synthase

PDB Compounds: (A:) O-phosphoseryl-tRNA(Sec) selenium transferase

SCOPe Domain Sequences for d3bc8a1:

Sequence, based on SEQRES records:

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}
earrahehlirllleqgkcpedgwdestlelflhelavmdsnnflgncgvgeregrvasa
lvarrhyrfihgigrsgdisavqpkaagssllnkitnslvlnviklagvhsvascfvvpm
atgmsltlcfltlrhkrpkakyiiwpridqkscfksmvtagfepvvienvlegdelrtdl
kaveakiqelgpehilclhsttacfaprvpdrleelavicanydiphvvnnayglqsskc
mhliqqgarvgridafvqsldknfmvpvggaiiagfnepfiqdiskmypgrasaspsldv
litllslgcsgyrkllkerkemfvylstqlkklaeahnerllqtphnpislamtlktidg
hhdkavtqlgsmlftrqvsgaravplgnvqtvsghtfrgfmshadnypcaylnaaaaigm
kmqdvdlfikrldkclnivrkeqtr

Sequence, based on observed residues (ATOM records):

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}
earrahehlirllleqgkcpedgwdestlelflhelavmdsnnflgncgvgeregrvasa
lvarrhyrfihgigrqpkaagssllnkitnslvlnviklagvhsvascfvvpmatgmslt
lcfltlrhkrpkakyiiwpridqkscfksmvtagfepvvienvlegdelrtdlkaveaki
qelgpehilclhsttacfaprvpdrleelavicanydiphvvnnayglqsskcmhliqqg
arvgridafvqsldknfmvpvggaiiagfnepfiqdiskmypgrasaspsldvlitllsl
gcsgyrkllkerkemfvylstqlkklaeahnerllqtphnpislamtlktidghhdkavt
qlgsmlftrqvsgaravplgnvqtvsghtfrgfmshadnypcaylnaaaaigmkmqdvdl
fikrldkclnivrkeqtr

Timeline for d3bc8a1:

• d3bc8a1 first appeared in SCOP 1.75
  
• d3bc8a1 appears in SCOPe 2.07