SCOPe 2.03: Domain d3bbxm1: 3bbx M:1-136

Lineage for d3bbxm1 (3bbx M:1-136)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.41: alpha/beta-Hammerhead [54664] (5 superfamilies)
   core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids

4. Superfamily d.41.4: Ribosomal protein L16p/L10e [54686] (2 families)

5. Family d.41.4.2: Ribosomal protein L16p [117888] (1 protein)
   Pfam PF00252

6. Protein Ribosomal protein L16p [117889] (4 species)

7. Species Escherichia coli [TaxId:562] [143200] (29 PDB entries)
   Uniprot P0ADY7 1-136

8. Domain d3bbxm1: 3bbx M:1-136 [155110]
   Other proteins in same PDB: d3bbx01, d3bbx11, d3bbx31, d3bbx41, d3bbxc1, d3bbxc2, d3bbxd1, d3bbxe1, d3bbxf1, d3bbxg1, d3bbxg2, d3bbxh1, d3bbxh2, d3bbxj1, d3bbxk1, d3bbxl1, d3bbxn1, d3bbxo1, d3bbxp1, d3bbxq1, d3bbxr1, d3bbxs1, d3bbxt1, d3bbxu1, d3bbxv1, d3bbxw1, d3bbxx1, d3bbxy1, d3bbxz1
   automatically matched to d1vs6m1
   protein/RNA complex; complexed with mg

Details for d3bbxm1

PDB Entry: 3bbx, 10 Å

PDB Description: the hsp15 protein fitted into the low resolution cryo-em map of the 50s.nc-trna.hsp15 complex

PDB Compounds: (M:) 50S ribosomal protein L16

SCOPe Domain Sequences for d3bbxm1:

Sequence; same for both SEQRES and ATOM records:

>d3bbxm1 d.41.4.2 (M:1-136) Ribosomal protein L16p {Escherichia coli [TaxId: 562]}
mlqpkrtkfrkmhkgrnrglaqgtdvsfgsfglkavgrgrltarqieaarramtravkrq
gkiwirvfpdkpitekplavrmgkgkgnveywvaliqpgkvlyemdgvpeelareafkla
aaklpikttfvtktvm

Timeline for d3bbxm1:

• d3bbxm1 first appeared in SCOP 1.75
  
• d3bbxm1 appears in SCOPe 2.02
  
• d3bbxm1 appears in SCOPe 2.04
  
• d3bbxm1 appears in the current release, SCOPe 2.08