SCOPe 2.08: Domain d2zmia_: 2zmi A:

Lineage for d2zmia_ (2zmi A:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Vitamin D nuclear receptor [48528] (2 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [101432] (25 PDB entries)

8. Domain d2zmia_: 2zmi A: [154691]
   automated match to d1rkha_
   protein/DNA complex; complexed with edo, fmt, tt2

Details for d2zmia_

PDB Entry: 2zmi, 1.7 Å

PDB Description: Crystal Structure of Rat Vitamin D Receptor Bound to Adamantyl Vitamin D Analogs: Structural Basis for Vitamin D Receptor Antagonism and/or Partial Agonism

PDB Compounds: (A:) Vitamin D3 receptor

SCOPe Domain Sequences for d2zmia_:

Sequence, based on SEQRES records:

>d2zmia_ a.123.1.1 (A:) Vitamin D nuclear receptor {Norway rat (Rattus norvegicus) [TaxId: 10116]}
rpklseeqqhiiailldahhktydptyadfrdfrppvrmdgstgsvtldlsplsmlphla
dlvsysiqkvigfakmipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsq
dykydvtdvskaghtlelieplikfqvglkklnlheeehvllmaicivspdrpgvqdakl
veaiqdrlsntlqtyircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpens
mkltplvlevfgn

Sequence, based on observed residues (ATOM records):

>d2zmia_ a.123.1.1 (A:) Vitamin D nuclear receptor {Norway rat (Rattus norvegicus) [TaxId: 10116]}
rpklseeqqhiiailldahhktydptyadfrdfrppvrmsplsmlphladlvsysiqkvi
gfakmipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsqdykydvtdvsk
aghtlelieplikfqvglkklnlheeehvllmaicivspdrpgvqdaklveaiqdrlsnt
lqtyircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpensmkltplvlevf
gn

Timeline for d2zmia_:

• d2zmia_ first appeared in SCOP 1.75, called d2zmia1
  
• d2zmia_ appears in SCOPe 2.07