Lineage for d2zkra1 (2zkr a:2-244)

  1. Root: SCOPe 2.08
  2. 3042554Class i: Low resolution protein structures [58117] (25 folds)
  3. 3042555Fold i.1: Ribosome and ribosomal fragments [58118] (1 superfamily)
  4. 3042556Superfamily i.1.1: Ribosome and ribosomal fragments [58119] (3 families) (S)
  5. 3042557Family i.1.1.1: Ribosome complexes [58120] (3 proteins)
  6. 3043338Protein Eukaryotic, cytoplasmic (80S ribosome functional complex) [267636] (5 species)
  7. 3043462Species Dog (Canis familiaris) [TaxId:9615] [267690] (2 PDB entries)
  8. 3043475Domain d2zkra1: 2zkr a:2-244 [154604]
    protein/RNA complex
    protein/RNA complex

Details for d2zkra1

PDB Entry: 2zkr (more details), 8.7 Å

PDB Description: Structure of a mammalian Ribosomal 60S subunit within an 80S complex obtained by docking homology models of the RNA and proteins into an 8.7 A cryo-EM map
PDB Compounds: (a:) 60S Ribosomal protein L8

SCOPe Domain Sequences for d2zkra1:

Sequence, based on SEQRES records: (download)

>d2zkra1 i.1.1.1 (a:2-244) Eukaryotic, cytoplasmic (80S ribosome functional complex) {Dog (Canis familiaris) [TaxId: 9615]}
grvirgqrkgagsvfrahvkhrkgaarlravdfaerhgyikgivkdiihdpgrgaplakv
vfrdpyrfkkrtelfiaaegihtgqfvycgkkaqlnignvlpvgtmpegtivccleekpg
drgklarasgnyatvishnpetkktrvklpsgskkvissanravvgvvagggridkpilk
agrayhkykakrncwprvrgvamnpvehpfgggnhqhigkpstirrdapagrkvgliaar
rtg

Sequence, based on observed residues (ATOM records): (download)

>d2zkra1 i.1.1.1 (a:2-244) Eukaryotic, cytoplasmic (80S ribosome functional complex) {Dog (Canis familiaris) [TaxId: 9615]}
grvirgqrkgagsvfrahvkhrkgaarlravdfaerhgyikgivkdiihdpgrgaplakv
vfrdpyrfkkrtelfiaaegihtgqfvycgkkaqlnignvlpvgtmpegtivccleekpg
drgklarasgnyatvishnpetkktrvklpsgskkvissanravvgvvagggridkpilk
agrayhkykakrncwprvrgvamnpvhpfgggnhqhigkpstirrdapagrkvgliaarr
tg

SCOPe Domain Coordinates for d2zkra1:

Click to download the PDB-style file with coordinates for d2zkra1.
(The format of our PDB-style files is described here.)

Timeline for d2zkra1: