SCOPe 2.02: Domain d2zjpj1: 2zjp J:6-141

Lineage for d2zjpj1 (2zjp J:6-141)

1. Root: SCOPe 2.02

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.41: alpha/beta-Hammerhead [54664] (5 superfamilies)
   core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids

4. Superfamily d.41.4: Ribosomal protein L16p/L10e [54686] (2 families)

5. Family d.41.4.2: Ribosomal protein L16p [117888] (1 protein)
   Pfam PF00252

6. Protein Ribosomal protein L16p [117889] (4 species)

7. Species Deinococcus radiodurans [TaxId:1299] [160196] (6 PDB entries)
   Uniprot Q9RXJ5 5-140

8. Domain d2zjpj1: 2zjp J:6-141 [154502]
   Other proteins in same PDB: d2zjp11, d2zjp21, d2zjp31, d2zjp41, d2zjpa1, d2zjpa2, d2zjpb1, d2zjpc1, d2zjpd1, d2zjpe1, d2zjpe2, d2zjpf1, d2zjpf2, d2zjpg1, d2zjph1, d2zjpi1, d2zjpk1, d2zjpl1, d2zjpm1, d2zjpn1, d2zjpo1, d2zjpp1, d2zjpq1, d2zjpr1, d2zjps1, d2zjpt1, d2zjpu1, d2zjpv1, d2zjpw1, d2zjpy1
   automatically matched to 2ZJR J:6-141
   protein/RNA complex; complexed with mg, no1, zn

Details for d2zjpj1

PDB Entry: 2zjp, 3.7 Å

PDB Description: thiopeptide antibiotic nosiheptide bound to the large ribosomal subunit of deinococcus radiodurans

PDB Compounds: (J:) 50S ribosomal protein L16

SCOPe Domain Sequences for d2zjpj1:

Sequence; same for both SEQRES and ATOM records:

>d2zjpj1 d.41.4.2 (J:6-141) Ribosomal protein L16p {Deinococcus radiodurans [TaxId: 1299]}
krtkfrkqfrgrmtgdakggdyvafgdygliamepawiksnqieacrivmsrhfrrggki
yirifpdkpvtkkpaetrmgkgkgaveywvsvvkpgrvmfevagvteeqakeafrlaghk
lpiqtkmvkrevydea

Timeline for d2zjpj1:

• d2zjpj1 first appeared in SCOP 1.75
  
• d2zjpj1 appears in SCOPe 2.01
  
• d2zjpj1 appears in SCOPe 2.03
  
• d2zjpj1 appears in the current release, SCOPe 2.08