SCOPe 2.05: Domain d2zjpa2: 2zjp A:33-127

Lineage for d2zjpa2 (2zjp A:33-127)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.40: OB-fold [50198] (16 superfamilies)
   barrel, closed or partly opened n=5, S=10 or S=8; greek-key

4. Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families)

5. Family b.40.4.5: Cold shock DNA-binding domain-like [50282] (31 proteins)
   barrel, closed; n=5, S=8

6. Protein N-terminal domain of ribosomal protein L2 [50299] (5 species)
   incomplete OB-fold lacking the last strand

7. Species Deinococcus radiodurans [TaxId:1299] [159085] (5 PDB entries)
   Uniprot Q9RXJ9 33-127

8. Domain d2zjpa2: 2zjp A:33-127 [154491]
   Other proteins in same PDB: d2zjp11, d2zjp21, d2zjp31, d2zjp41, d2zjpa1, d2zjpb1, d2zjpc1, d2zjpd1, d2zjpe1, d2zjpe2, d2zjpf1, d2zjpf2, d2zjpg1, d2zjph1, d2zjpi1, d2zjpj1, d2zjpk1, d2zjpl1, d2zjpm1, d2zjpn1, d2zjpo1, d2zjpp1, d2zjpq1, d2zjpr1, d2zjps1, d2zjpt1, d2zjpu1, d2zjpv1, d2zjpw1, d2zjpy1
   automatically matched to 2ZJR A:33-127
   protein/RNA complex; complexed with mg, no1, zn

Details for d2zjpa2

PDB Entry: 2zjp, 3.7 Å

PDB Description: thiopeptide antibiotic nosiheptide bound to the large ribosomal subunit of deinococcus radiodurans

PDB Compounds: (A:) 50S ribosomal protein L2

SCOPe Domain Sequences for d2zjpa2:

Sequence; same for both SEQRES and ATOM records:

>d2zjpa2 b.40.4.5 (A:33-127) N-terminal domain of ribosomal protein L2 {Deinococcus radiodurans [TaxId: 1299]}
ltealpktggrnnrgritsrfiggghkrlyriidfkrrdksgvnakvaaieydpnrsari
allhyadgekryilapegltvgatvnagpeaepkl

Timeline for d2zjpa2:

• d2zjpa2 first appeared in SCOP 1.75
  
• d2zjpa2 appears in SCOPe 2.04
  
• d2zjpa2 appears in SCOPe 2.06
  
• d2zjpa2 appears in the current release, SCOPe 2.08