Lineage for d2w6ka1 (2w6k A:1-139)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2152154Fold c.151: CobE/GbiG C-terminal domain-like [159663] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32154; strand 5 is antiparallel to the rest
  4. 2152155Superfamily c.151.1: CobE/GbiG C-terminal domain-like [159664] (1 family) (S)
    probably involved in deacylation steps in both anaerobic and aerobic pathways of cobalamin biosynthesis
    automatically mapped to Pfam PF01890
  5. 2152156Family c.151.1.1: CobE/GbiG C-terminal domain-like [159665] (3 protein domains)
    C-terminal part of Pfam PF01890 (CbiG); corresponds to standalone protein CobE in the aerobic pathway; also includes resent structure 3BY5
  6. 2152157Protein Cobalamin biosynthesis protein CobE [159666] (2 species)
    predicted to facilitate the deacylation of precorrin-5 intermediate; this step can proceed non-enzymatically in vitro
  7. 2152160Species Pseudomonas aeruginosa [TaxId:287] [159668] (2 PDB entries)
    Uniprot Q9HZQ0 1-139
  8. 2152161Domain d2w6ka1: 2w6k A:1-139 [153740]
    previously 2BSN
    complexed with gol, so4

Details for d2w6ka1

PDB Entry: 2w6k (more details), 1.7 Å

PDB Description: the crystal structure at 1.7 a resolution of cobe, a protein from the cobalamin (vitamin b12) biosynthetic pathway
PDB Compounds: (A:) cobe

SCOPe Domain Sequences for d2w6ka1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2w6ka1 c.151.1.1 (A:1-139) Cobalamin biosynthesis protein CobE {Pseudomonas aeruginosa [TaxId: 287]}

SCOPe Domain Coordinates for d2w6ka1:

Click to download the PDB-style file with coordinates for d2w6ka1.
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Timeline for d2w6ka1: