SCOP 1.75: Domain d2vyvc1: 2vyv C:0-147,C:312-329

Lineage for d2vyvc1 (2vyv C:0-147,C:312-329)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (12 families)

5. Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (22 proteins)
   family members also share a common alpha+beta fold in C-terminal domain

6. Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801] (19 species)

7. Species Escherichia coli [TaxId:562] [51802] (9 PDB entries)
   Uniprot P06977

8. Domain d2vyvc1: 2vyv C:0-147,C:312-329 [153719]
   Other proteins in same PDB: d2vyva2, d2vyvb2, d2vyvc2
   automatically matched to d1dc3a1
   complexed with 1gp, fmt, nad

Details for d2vyvc1

PDB Entry: 2vyv, 2.38 Å

PDB Description: structure of e.coli gapdh rat sperm gapdh heterotetramer

PDB Compounds: (C:) glyceraldehyde-3-phosphate dehydrogenase

SCOP Domain Sequences for d2vyvc1:

Sequence; same for both SEQRES and ATOM records:

>d2vyvc1 c.2.1.3 (C:0-147,C:312-329) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}
tikvgingfgrigrivfraaqkrsdieivaindlldadymaymlkydsthgrfdgtvevk
dghlivngkkirvtaerdpanlkwdevgvdvvaeatglfltdetarkhitagakkvvmtg
pskdntpmfvkganfdkyagqdivsnasXnetgysnkvldliahisk

Timeline for d2vyvc1:

• d2vyvc1 is new in SCOP 1.75
  
• d2vyvc1 appears in SCOPe 2.01
  
• d2vyvc1 appears in the current release, SCOPe 2.08