Lineage for d2vynb2 (2vyn B:147-310)

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1915719Fold d.81: FwdE/GAPDH domain-like [55346] (4 superfamilies)
    core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1
  4. 1915720Superfamily d.81.1: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55347] (5 families) (S)
    N-terminal domain is the classic Rossmann-fold
  5. 1915721Family d.81.1.1: GAPDH-like [55348] (6 proteins)
    has many additional secondary structures
  6. 1915812Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [55349] (19 species)
  7. 1915868Species Escherichia coli [TaxId:562] [55350] (9 PDB entries)
    Uniprot P06977
  8. 1915872Domain d2vynb2: 2vyn B:147-310 [153710]
    Other proteins in same PDB: d2vyna1, d2vynb1, d2vync1
    automated match to d1s7ca2
    complexed with fmt, nad

Details for d2vynb2

PDB Entry: 2vyn (more details), 2.2 Å

PDB Description: structure of e.coli gapdh rat sperm gapdh heterotetramer
PDB Compounds: (B:) glyceraldehyde-3-phosphate dehydrogenase

SCOPe Domain Sequences for d2vynb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2vynb2 d.81.1.1 (B:147-310) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}
scttnclaplakvindnfgiieglmttvhattatqktvdgpshkdwrggrgasqniipss
tgaakavgkvlpelngkltgmafrvptpnvsvvdltvrlekaatyeqikaavkaaaegem
kgvlgyteddvvstdfngevctsvfdakagialndnfvklvswy

SCOPe Domain Coordinates for d2vynb2:

Click to download the PDB-style file with coordinates for d2vynb2.
(The format of our PDB-style files is described here.)

Timeline for d2vynb2: