SCOP 1.75: Domain d2vwja2: 2vwj A:348-756

Lineage for d2vwja2 (2vwj A:348-756)

1. Root: SCOP 1.75

2. Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (6 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.1: DNA polymerase I [56673] (4 proteins)

6. Protein Family B DNA polymerase [56680] (7 species)

7. Species Archaeon Thermococcus gorgonarius [TaxId:71997] [56682] (3 PDB entries)

8. Domain d2vwja2: 2vwj A:348-756 [153676]
   Other proteins in same PDB: d2vwja1
   automatically matched to d1qqca2
   complexed with k; mutant

Details for d2vwja2

PDB Entry: 2vwj, 2.78 Å

PDB Description: uracil recognition in archaeal dna polymerases captured by x-ray crystallography.

PDB Compounds: (A:) DNA polymerase

SCOP Domain Sequences for d2vwja2:

Sequence; same for both SEQRES and ATOM records:

>d2vwja2 e.8.1.1 (A:348-756) Family B DNA polymerase {Archaeon Thermococcus gorgonarius [TaxId: 71997]}
stgnlvewfllrkayernelapnkpderelarrresyaggyvkeperglwenivyldfrs
lypsiiithnvspdtlnregceeydvapqvghkfckdfpgfipsllgdlleerqkvkkkm
katidpiekklldyrqraikilansfygyygyakarwyckecaesvtawgrqyiettire
ieekfgfkvlyadtdgffatipgadaetvkkkakefldyinaklpglleleyegfykrgf
fvtkkkyavideedkittrgleivrrdwseiaketqarvleailkhgdveeavrivkevt
eklskyevppeklviyeqitrdlkdykatgphvavakrlaargikirpgtvisyivlkgs
grigdraipfdefdpakhkydaeyyienqvlpaverilrafgyrkedlr

Timeline for d2vwja2:

• d2vwja2 is new in SCOP 1.75
  
• d2vwja2 appears in SCOPe 2.01
  
• d2vwja2 appears in the current release, SCOPe 2.08