SCOPe 2.05: Domain d2vv0b_: 2vv0 B:

Lineage for d2vv0b_ (2vv0 B:)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein automated matches [190059] (14 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187214] (138 PDB entries)

8. Domain d2vv0b_: 2vv0 B: [153606]
   automated match to d1wm0x_
   protein/DNA complex; complexed with hxa

Details for d2vv0b_

PDB Entry: 2vv0, 2.55 Å

PDB Description: hppargamma ligand binding domain in complex with dha

PDB Compounds: (B:) Peroxisome proliferator-activated receptor gamma

SCOPe Domain Sequences for d2vv0b_:

Sequence, based on SEQRES records:

>d2vv0b_ a.123.1.1 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
sadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkikfkhi
tplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiy
tmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaif
iaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivt
ehvqllqvikktetdmslhpllqeiykdl

Sequence, based on observed residues (ATOM records):

>d2vv0b_ a.123.1.1 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
sadlralakhlydsyiksfpltkakarailtgkdkspfviydmnslmmgedkikkevair
ifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvl
isegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgl
lnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikkte
thpllqeiykdl

Timeline for d2vv0b_:

• d2vv0b_ first appeared in SCOP 1.75, called d2vv0b1
  
• d2vv0b_ appears in SCOPe 2.04
  
• d2vv0b_ appears in SCOPe 2.06
  
• d2vv0b_ appears in the current release, SCOPe 2.08