SCOPe 2.07: Domain d2vrja_: 2vrj A:

Lineage for d2vrja_ (2vrj A:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.4: Family 1 of glycosyl hydrolase [51521] (6 proteins)

6. Protein automated matches [190245] (11 species)
   not a true protein

7. Species Thermotoga maritima [TaxId:2336] [187021] (20 PDB entries)

8. Domain d2vrja_: 2vrj A: [153512]
   automated match to d1od0b_
   complexed with act, ca, ncw

Details for d2vrja_

PDB Entry: 2vrj, 1.9 Å

PDB Description: beta-glucosidase from thermotoga maritima in complex with n-octyl-5-deoxy-6-oxa-n-(thio)carbamoylcalystegine

PDB Compounds: (A:) beta-glucosidase a

SCOPe Domain Sequences for d2vrja_:

Sequence, based on SEQRES records:

>d2vrja_ c.1.8.4 (A:) automated matches {Thermotoga maritima [TaxId: 2336]}
vkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrwk
edieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyhw
dlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvhap
gmrdiyvafravhnllraharavkvfretvkdgkigivfnngyfepasekeediravrfm
hqfnnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkf
dpdapakvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvse
dgrvhdqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdys
tqkrivkdsgywysnvvknngle

Sequence, based on observed residues (ATOM records):

>d2vrja_ c.1.8.4 (A:) automated matches {Thermotoga maritima [TaxId: 2336]}
vkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrwk
edieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyhw
dlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvhap
gmrdiyvafravhnllraharavkvfretvkdgkigivfnngyfepasekiravrfmhqf
nnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkfdpp
akvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvsedgrvh
dqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdystqkri
vkdsgywysnvvknngle

Timeline for d2vrja_:

• d2vrja_ first appeared in SCOP 1.75, called d2vrja1
  
• d2vrja_ appears in SCOPe 2.06
  
• d2vrja_ appears in the current release, SCOPe 2.08