SCOP 1.75: Domain d2vrja1: 2vrj A:3-445

Lineage for d2vrja1 (2vrj A:3-445)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (14 families)

5. Family c.1.8.4: Family 1 of glycosyl hydrolase [51521] (5 proteins)

6. Protein Beta-glucosidase A [51528] (7 species)

7. Species Thermotoga maritima [TaxId:2336] [89475] (23 PDB entries)
   Uniprot Q08638

8. Domain d2vrja1: 2vrj A:3-445 [153512]
   automatically matched to d1od0b_
   complexed with act, ca, ncw

Details for d2vrja1

PDB Entry: 2vrj, 1.9 Å

PDB Description: beta-glucosidase from thermotoga maritima in complex with n-octyl-5-deoxy-6-oxa-n-(thio)carbamoylcalystegine

PDB Compounds: (A:) beta-glucosidase a

SCOP Domain Sequences for d2vrja1:

Sequence, based on SEQRES records:

>d2vrja1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]}
vkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrwk
edieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyhw
dlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvhap
gmrdiyvafravhnllraharavkvfretvkdgkigivfnngyfepasekeediravrfm
hqfnnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkf
dpdapakvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvse
dgrvhdqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdys
tqkrivkdsgywysnvvknngle

Sequence, based on observed residues (ATOM records):

>d2vrja1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]}
vkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrwk
edieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyhw
dlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvhap
gmrdiyvafravhnllraharavkvfretvkdgkigivfnngyfepasekiravrfmhqf
nnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkfdpp
akvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvsedgrvh
dqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdystqkri
vkdsgywysnvvknngle

Timeline for d2vrja1:

• d2vrja1 is new in SCOP 1.75
  
• d2vrja1 is called d2vrja_ in SCOPe 2.01
  
• d2vrja1 appears in the current release, SCOPe 2.08, called d2vrja_