SCOPe 2.08: Domain d2vo9c2: 2vo9 C:1-148

Lineage for d2vo9c2 (2vo9 C:1-148)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.65: Hedgehog/DD-peptidase [55165] (1 superfamily)
   alpha-beta(2)-alpha-beta(2); 2 layers: alpha/beta

4. Superfamily d.65.1: Hedgehog/DD-peptidase [55166] (5 families)
   zinc-binding motif

5. Family d.65.1.5: VanY-like [160436] (2 proteins)
   Pfam PF02557

6. Protein automated matches [190906] (1 species)
   not a true protein

7. Species Bacteriophage a500 [TaxId:40522] [188351] (1 PDB entry)

8. Domain d2vo9c2: 2vo9 C:1-148 [153364]
   Other proteins in same PDB: d2vo9a1, d2vo9a2, d2vo9b3, d2vo9c3
   automated match to d2vo9a1
   complexed with so4, zn

Details for d2vo9c2

PDB Entry: 2vo9, 1.8 Å

PDB Description: crystal structure of the enzymatically active domain of the listeria monocytogenes bacteriophage 500 endolysin ply500

PDB Compounds: (C:) l-alanyl-d-glutamate peptidase

SCOPe Domain Sequences for d2vo9c2:

Sequence; same for both SEQRES and ATOM records:

>d2vo9c2 d.65.1.5 (C:1-148) automated matches {Bacteriophage a500 [TaxId: 40522]}
malteawliekanrklnaggmykitsdktrnvikkmakegiylcvaqgyrstaeqnalya
qgrtkpgaivtnakggqsnhnygvavdlclytndgkdviwesttsrwkkvvaamkaegfk
wggdwksfkdyphfelcdavsgekipaa

Timeline for d2vo9c2:

• d2vo9c2 first appeared in SCOP 1.75, called d2vo9c1
  
• d2vo9c2 appears in SCOPe 2.07