SCOPe 2.07: Domain d2vngb_: 2vng B:

Lineage for d2vngb_ (2vng B:)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.18: Galactose-binding domain-like [49784] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll

4. Superfamily b.18.1: Galactose-binding domain-like [49785] (35 families)

5. Family b.18.1.33: NPCBM-like [158966] (3 proteins)
   Pfam PF08305

6. Protein automated matches [190905] (1 species)
   not a true protein

7. Species Clostridium perfringens [TaxId:1502] [188350] (5 PDB entries)

8. Domain d2vngb_: 2vng B: [153336]
   Other proteins in same PDB: d2vnga1
   automated match to d2vnga1
   complexed with a2g, ca, fuc, gal

Details for d2vngb_

PDB Entry: 2vng, 1.4 Å

PDB Description: family 51 carbohydrate binding module from a family 98 glycoside hydrolase produced by clostridium perfringens in complex with blood group a-trisaccharide ligand.

PDB Compounds: (B:) cpe0329

SCOPe Domain Sequences for d2vngb_:

Sequence; same for both SEQRES and ATOM records:

>d2vngb_ b.18.1.33 (B:) automated matches {Clostridium perfringens [TaxId: 1502]}
esrdvylsdldwlnathgddtkskivqknhpftpgnnnqstkislkmedgsisefekglg
tiagspstitydisgagvtkffsylgidrsanpineqyakvdkievvvdgkviystinqf
pngltyetpaikvdlnipenakrlqlksyagektwgdevvyadakftakgdfv

Timeline for d2vngb_:

• d2vngb_ first appeared in SCOP 1.75, called d2vngb1
  
• d2vngb_ appears in SCOPe 2.06
  
• d2vngb_ appears in the current release, SCOPe 2.08