SCOPe 2.02: Domain d2vm4a1: 2vm4 A:3-159

Lineage for d2vm4a1 (2vm4 A:3-159)

1. Root: SCOPe 2.02

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
   sandwich; 7 strands in 2 sheets, greek-key
   variations: some members have additional 1-2 strands

4. Superfamily b.6.1: Cupredoxins [49503] (8 families)
   contains copper-binding site

5. Family b.6.1.3: Multidomain cupredoxins [49550] (7 proteins)

6. Protein Nitrite reductase, NIR [49551] (5 species)
   consists of two domains of this fold

7. Species Alcaligenes xylosoxidans [TaxId:85698] [49554] (23 PDB entries)
   Uniprot O68601 25-360 ! Uniprot O68601 26-359 ! Uniprot O68601

8. Domain d2vm4a1: 2vm4 A:3-159 [153314]
   automatically matched to d1gs6x1
   complexed with cu, pg4, zn

Details for d2vm4a1

PDB Entry: 2vm4, 1.9 Å

PDB Description: structure of alcaligenes xylosoxidans nitrite reductase in space group r3 - 2 of 2

PDB Compounds: (A:) dissimilatory copper-containing nitrite reductase

SCOPe Domain Sequences for d2vm4a1:

Sequence; same for both SEQRES and ATOM records:

>d2vm4a1 b.6.1.3 (A:3-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]}
adklphtkvtlvappqvhpheqatksgpkvveftmtieekkmviddkgttlqamtfngsm
pgptlvvhegdyvqltlvnpatnamphnvdfhgatgalggakltnvnpgeqatlrfkadr
sgtfvyhcapegmvpwhvvsgmsgtlmvlprdglkdp

Timeline for d2vm4a1:

• d2vm4a1 first appeared in SCOP 1.75
  
• d2vm4a1 appears in SCOPe 2.01
  
• d2vm4a1 appears in SCOPe 2.03
  
• d2vm4a1 appears in the current release, SCOPe 2.08