SCOPe 2.06: Domain d2vhoe2: 2vho E:9-77

Lineage for d2vhoe2 (2vho E:9-77)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.50: dsRBD-like [54767] (5 superfamilies)
   alpha-beta(3)-alpha; 2 layers: alpha/beta

4. Superfamily d.50.1: dsRNA-binding domain-like [54768] (4 families)

5. Family d.50.1.2: Ribosomal S5 protein, N-terminal domain [54778] (1 protein)
   automatically mapped to Pfam PF00333

6. Protein Ribosomal S5 protein, N-terminal domain [54779] (3 species)
   lacks the N-terminal helix

7. Species Escherichia coli [TaxId:562] [160202] (24 PDB entries)
   Uniprot P0A7W1 9-77

8. Domain d2vhoe2: 2vho E:9-77 [153127]
   Other proteins in same PDB: d2vhob1, d2vhoc1, d2vhoc2, d2vhod1, d2vhoe1, d2vhof1, d2vhog1, d2vhoh1, d2vhoi1, d2vhoj1, d2vhok1, d2vhol1, d2vhom1, d2vhon1, d2vhoo1, d2vhop1, d2vhoq1, d2vhor1, d2vhos1, d2vhot1, d2vhou1
   protein/RNA complex; complexed with mg
   protein/RNA complex; complexed with mg

Details for d2vhoe2

PDB Entry: 2vho, 3.74 Å

PDB Description: Structure of PDF binding helix in complex with the ribosome (part 3 of 4)

PDB Compounds: (E:) 30S ribosomal protein S5

SCOPe Domain Sequences for d2vhoe2:

Sequence; same for both SEQRES and ATOM records:

>d2vhoe2 d.50.1.2 (E:9-77) Ribosomal S5 protein, N-terminal domain {Escherichia coli [TaxId: 562]}
elqekliavnrvsktvkggrifsftaltvvgdgngrvgfgygkarevpaaiqkamekarr
nminvalnn

Timeline for d2vhoe2:

• d2vhoe2 first appeared in SCOP 1.75
  
• d2vhoe2 appears in SCOPe 2.05
  
• d2vhoe2 appears in SCOPe 2.07
  
• d2vhoe2 appears in the current release, SCOPe 2.08