SCOPe 2.05: Domain d2vhmr1: 2vhm R:1-103

Lineage for d2vhmr1 (2vhm R:1-103)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.155: L21p-like [141090] (1 superfamily)
   core: sandwich, 6 strands in 2 sheets

4. Superfamily b.155.1: L21p-like [141091] (1 family)
   automatically mapped to Pfam PF00829

5. Family b.155.1.1: Ribosomal protein L21p [141092] (1 protein)
   Pfam PF00829

6. Protein Ribosomal protein L21p [141093] (3 species)

7. Species Escherichia coli [TaxId:562] [141094] (27 PDB entries)
   Uniprot P0AG48 1-103

8. Domain d2vhmr1: 2vhm R:1-103 [153081]
   Other proteins in same PDB: d2vhm01, d2vhm11, d2vhm31, d2vhm41, d2vhmc1, d2vhmc2, d2vhmd1, d2vhme1, d2vhmf1, d2vhmg1, d2vhmg2, d2vhmh1, d2vhmh2, d2vhmi1, d2vhmi2, d2vhmj1, d2vhmk1, d2vhml1, d2vhmm1, d2vhmn1, d2vhmo1, d2vhmp1, d2vhmq1, d2vhms1, d2vhmt1, d2vhmu1, d2vhmv1, d2vhmw1, d2vhmx1, d2vhmy1, d2vhmz1
   protein/RNA complex; complexed with mg
   protein/RNA complex; complexed with mg

Details for d2vhmr1

PDB Entry: 2vhm, 3.74 Å

PDB Description: Structure of PDF binding helix in complex with the ribosome

PDB Compounds: (R:) 50S ribosomal protein L21

SCOPe Domain Sequences for d2vhmr1:

Sequence; same for both SEQRES and ATOM records:

>d2vhmr1 b.155.1.1 (R:1-103) Ribosomal protein L21p {Escherichia coli [TaxId: 562]}
myavfqsggkqhrvsegqtvrlekldiatgetvefaevlmiangeevkigvpfvdggvik
aevvahgrgekvkivkfrrrkhyrkqqghrqwftdvkitgisa

Timeline for d2vhmr1:

• d2vhmr1 first appeared in SCOP 1.75
  
• d2vhmr1 appears in SCOPe 2.04
  
• d2vhmr1 appears in SCOPe 2.06
  
• d2vhmr1 appears in the current release, SCOPe 2.08