Lineage for d2vhmn1 (2vhm N:1-127)

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1684938Fold d.188: Prokaryotic ribosomal protein L17 [64262] (1 superfamily)
    alpha-beta-alpha(3)-beta(2); 2 layers: alpha/beta;
  4. 1684939Superfamily d.188.1: Prokaryotic ribosomal protein L17 [64263] (1 family) (S)
    some topological similarity to ribosomal protein L22
    automatically mapped to Pfam PF01196
  5. 1684940Family d.188.1.1: Prokaryotic ribosomal protein L17 [64264] (1 protein)
  6. 1684941Protein Prokaryotic ribosomal protein L17 [64265] (4 species)
  7. 1684949Species Escherichia coli [TaxId:562] [160270] (27 PDB entries)
    Uniprot P02416 1-127
  8. 1684970Domain d2vhmn1: 2vhm N:1-127 [153077]
    Other proteins in same PDB: d2vhm01, d2vhm11, d2vhm31, d2vhm41, d2vhmc1, d2vhmc2, d2vhmd1, d2vhme1, d2vhmf1, d2vhmg1, d2vhmg2, d2vhmh1, d2vhmh2, d2vhmi1, d2vhmi2, d2vhmj1, d2vhmk1, d2vhml1, d2vhmm1, d2vhmo1, d2vhmp1, d2vhmq1, d2vhmr1, d2vhms1, d2vhmt1, d2vhmu1, d2vhmv1, d2vhmw1, d2vhmx1, d2vhmy1, d2vhmz1
    automatically matched to 2AW4 N:1-127
    protein/RNA complex; complexed with mg

Details for d2vhmn1

PDB Entry: 2vhm (more details), 3.74 Å

PDB Description: Structure of PDF binding helix in complex with the ribosome
PDB Compounds: (N:) 50S ribosomal protein L17

SCOPe Domain Sequences for d2vhmn1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2vhmn1 d.188.1.1 (N:1-127) Prokaryotic ribosomal protein L17 {Escherichia coli [TaxId: 562]}
mrhrksgrqlnrnsshrqamfrnmagslvrheiikttlpkakelrrvveplitlaktdsv
anrrlafartrdneivaklfnelgprfasraggytrilkcgfragdnapmayielvdrse
kaeaaae

SCOPe Domain Coordinates for d2vhmn1:

Click to download the PDB-style file with coordinates for d2vhmn1.
(The format of our PDB-style files is described here.)

Timeline for d2vhmn1: