Lineage for d2vgma2 (2vgm A:136-277)

  1. Root: SCOP 1.75
  2. 814173Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 835945Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 837367Superfamily c.55.4: Translational machinery components [53137] (2 families) (S)
  5. 837531Family c.55.4.2: ERF1/Dom34 middle domain-like [53143] (3 proteins)
  6. 837535Protein Dom34 [159645] (1 species)
  7. 837536Species Saccharomyces cerevisiae [TaxId:4932] [159646] (2 PDB entries)
    Uniprot P33309 136-277
  8. 837539Domain d2vgma2: 2vgm A:136-277 [153038]
    Other proteins in same PDB: d2vgma1, d2vgma3

Details for d2vgma2

PDB Entry: 2vgm (more details), 2.6 Å

PDB Description: structure of yeast dom34 : a protein related to translation termination factor erf1 and involved in no-go decay.
PDB Compounds: (A:) dom34

SCOP Domain Sequences for d2vgma2:

Sequence, based on SEQRES records: (download)

>d2vgma2 c.55.4.2 (A:136-277) Dom34 {Saccharomyces cerevisiae [TaxId: 4932]}

Sequence, based on observed residues (ATOM records): (download)

>d2vgma2 c.55.4.2 (A:136-277) Dom34 {Saccharomyces cerevisiae [TaxId: 4932]}

SCOP Domain Coordinates for d2vgma2:

Click to download the PDB-style file with coordinates for d2vgma2.
(The format of our PDB-style files is described here.)

Timeline for d2vgma2: