SCOPe 2.08: Domain d2vdfa_: 2vdf A:

Lineage for d2vdfa_ (2vdf A:)

1. Root: SCOPe 2.08

2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)

3. Fold f.4: Transmembrane beta-barrels [56924] (7 superfamilies)
   not a true fold, gathers together transmembrane barrels of different (n,S)
   annotated by the SCOP(e) curators as 'not a true fold'

4. Superfamily f.4.4: OMPT-like [69917] (3 families)
   forms (10,12) barrel

5. Family f.4.4.2: Outer membrane adhesin/invasin OpcA [75651] (1 protein)
   automatically mapped to Pfam PF07239

6. Protein Outer membrane adhesin/invasin OpcA [75652] (1 species)

7. Species Neisseria meningitidis [TaxId:487] [75653] (2 PDB entries)

8. Domain d2vdfa_: 2vdf A: [152991]
   automated match to d1k24a_
   complexed with oct, so4

Details for d2vdfa_

PDB Entry: 2vdf, 1.95 Å

PDB Description: structure of the opca adhesion from neisseria meningitidis determined by crystallization from the cubic mesophase

PDB Compounds: (A:) Outer membrane protein

SCOPe Domain Sequences for d2vdfa_:

Sequence, based on SEQRES records:

>d2vdfa_ f.4.4.2 (A:) Outer membrane adhesin/invasin OpcA {Neisseria meningitidis [TaxId: 487]}
aneftvhtdlssisstraflkekhkaakhigvradipfdanqgirleagfgrskkniinl
etdenklgktknvklptgvpenridlytgytytqtlsdslnfrvgaglgfesskdsiktt
khtlhssrqswlakvhadllsqlgngwyinpwsevkfdlnsryklntgvtnlkkdinqkt
ngwgfglganigkklgesasieagpfykqrtykesgefsvttksgdvsltipktsireyg
lrvgikf

Sequence, based on observed residues (ATOM records):

>d2vdfa_ f.4.4.2 (A:) Outer membrane adhesin/invasin OpcA {Neisseria meningitidis [TaxId: 487]}
aneftvhtdlssisstraflkekhkaakhigvradipfdanqgirleagfgrskkniinl
etdenklgktknvklptgvpenridlytgytytqtlsdslnfrvgaglgfesskdsilhs
srqswlakvhadllsqlgngwyinpwsevkfdlnsryklntdinqktngwgfglganigk
klgasieagpfykqrtykesgefsvsltipktsireyglrvgikf

Timeline for d2vdfa_:

• d2vdfa_ first appeared in SCOP 1.75, called d2vdfa1
  
• d2vdfa_ appears in SCOPe 2.07