Lineage for d2v8qa1 (2v8q A:396-548)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2538746Fold d.129: TBP-like [55944] (11 superfamilies)
    beta-alpha-beta(4)-alpha
  4. 2539572Superfamily d.129.6: KA1-like [103243] (3 families) (S)
    contains a single copy of this fold
  5. 2539581Family d.129.6.2: Ssp2 C-terminal domain-like [160723] (4 proteins)
    PfamB PB166430
  6. 2539582Protein 5'-AMP-activated protein kinase catalytic subunit alpha-1, AMPK1 [160728] (1 species)
  7. 2539583Species Norway rat (Rattus norvegicus) [TaxId:10116] [160729] (1 PDB entry)
    Uniprot P54645 396-548
  8. 2539584Domain d2v8qa1: 2v8q A:396-548 [152781]
    Other proteins in same PDB: d2v8qb1, d2v8qe1, d2v8qe2
    complexed with amp

Details for d2v8qa1

PDB Entry: 2v8q (more details), 2.1 Å

PDB Description: crystal structure of the regulatory fragment of mammalian ampk in complexes with amp
PDB Compounds: (A:) 5'-amp-activated protein kinase catalytic subunit alpha-1

SCOPe Domain Sequences for d2v8qa1:

Sequence, based on SEQRES records: (download)

>d2v8qa1 d.129.6.2 (A:396-548) 5'-AMP-activated protein kinase catalytic subunit alpha-1, AMPK1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
whlgirsqsrpndimaevcraikqldyewkvvnpyylrvrrknpvtstfskmslqlyqvd
srtylldfrsiddeiteaksgtatpqrsgsisnyrscqrsdsdaeaqgkpsevsltssvt
sldsspvdvaprpgshtieffemcanlikilaq

Sequence, based on observed residues (ATOM records): (download)

>d2v8qa1 d.129.6.2 (A:396-548) 5'-AMP-activated protein kinase catalytic subunit alpha-1, AMPK1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
whlgirsqsrpndimaevcraikqldyewkvvnpyylrvrrknpvtstfskmslqlyqvd
srtylldfrsiddevaprpgshtieffemcanlikilaq

SCOPe Domain Coordinates for d2v8qa1:

Click to download the PDB-style file with coordinates for d2v8qa1.
(The format of our PDB-style files is described here.)

Timeline for d2v8qa1: