SCOPe 2.05: Domain d2v6ac1: 2v6a C:150-475

Lineage for d2v6ac1 (2v6a C:150-475)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families)
   automatically mapped to Pfam PF00016

5. Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins)
   N-terminal domain is alpha+beta

6. Protein automated matches [226984] (5 species)
   not a true protein

7. Species Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [225548] (9 PDB entries)

8. Domain d2v6ac1: 2v6a C:150-475 [152696]
   Other proteins in same PDB: d2v6aa2, d2v6ab2, d2v6ac2, d2v6ad2, d2v6ae2, d2v6af2, d2v6ag2, d2v6ah2, d2v6ai_, d2v6aj_, d2v6ak_, d2v6al_, d2v6am_, d2v6an_, d2v6ao_, d2v6ap_
   automated match to d1gk8a1
   complexed with cap, edo, mg; mutant

Details for d2v6ac1

PDB Entry: 2v6a, 1.5 Å

PDB Description: crystal structure of chlamydomonas reinhardtii rubisco with large-subunit mutations v331a, g344s

PDB Compounds: (C:) ribulose bisphosphate carboxylase large chain

SCOPe Domain Sequences for d2v6ac1:

Sequence; same for both SEQRES and ATOM records:

>d2v6ac1 c.1.14.1 (C:150-475) automated matches {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]}
gpphgiqverdklnkygrgllgctikpklglsaknygravyeclrggldftkddenvnsq
pfmrwrdrflfvaeaiykaqaetgevkghylnatagtceemmkravcakelgvpiimhdy
ltggftantslaiycrdnglllhihramhavidrqrnhgihfrvlakalrmsggdhlhsg
tavgklegerevtlsfvdlmrddyvekdrsrgiyftqdwcsmpgvmpvasggihvwhmpa
lveifgddaclqfgggtlghpwgnapgaaanrvaleactqarnegrdlareggdvirsac
kwspelaaacevwkeikfefdtidkl

Timeline for d2v6ac1:

• d2v6ac1 first appeared in SCOP 1.75
  
• d2v6ac1 appears in SCOPe 2.04
  
• d2v6ac1 appears in SCOPe 2.06
  
• d2v6ac1 appears in the current release, SCOPe 2.08