Lineage for d2v3ja1 (2v3j A:23-251)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2528466Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2528467Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2528643Family c.116.1.6: EMG1/NEP1-like [159513] (3 proteins)
    Pfam PF03587; structurally most similar to the AF1056-like family, but more decorated
  6. 2528644Protein Essential for mitotic growth 1, EMG1 [159516] (1 species)
  7. 2528645Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [159517] (2 PDB entries)
    Uniprot Q06287 23-251
  8. 2528647Domain d2v3ja1: 2v3j A:23-251 [152459]
    complexed with so4

Details for d2v3ja1

PDB Entry: 2v3j (more details), 2 Å

PDB Description: the yeast ribosome synthesis factor emg1 alpha beta knot fold methyltransferase
PDB Compounds: (A:) essential for mitotic growth 1

SCOPe Domain Sequences for d2v3ja1:

Sequence, based on SEQRES records: (download)

>d2v3ja1 c.116.1.6 (A:23-251) Essential for mitotic growth 1, EMG1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

Sequence, based on observed residues (ATOM records): (download)

>d2v3ja1 c.116.1.6 (A:23-251) Essential for mitotic growth 1, EMG1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d2v3ja1:

Click to download the PDB-style file with coordinates for d2v3ja1.
(The format of our PDB-style files is described here.)

Timeline for d2v3ja1: